Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1130 ATGGAGTCCAATGTGGTTGAACCGGTTTGTCATGCCCCAGCTTCCTTCACCGACGACAATACCACGCATTCAAATGACAACCTTCTCAATTCTTGCAATGTGGAAGGTGAAAAGTCTAACAAGTTGATTGTAGACCATAAAATTTACCTTGCCGAAGATGAAATACCAAGAGTTGGGATGCGGTTTGAGCATTTGAAGCTGGCCCAGGATTTTTATGCAAGCTACGCAAAGAAAGTCAGTTTTGTAAGTAAGATACGGAACACAAATTTTGACAGGATGACAAAGGGGCCGATTAACCAATCTATTTATTGTAATCGAGAGGGCTTCCGTGGGTCTCGTGTCAAAGCACTGACATGGAAGAACACAATTGCAGTCATGGGGTGCAAAGCAAGGATATATGCAAAGTTTGTTACGGAGAAGCAAAATTGGGTCTTGTTGAAGGTTGATTTGAGGCACTCGCACCCATGTTCAACTAAAAAGGCAGTGCACTACCACGAGAATAGTGAGTTGACCAAGCATGCGAAATGCGTGATTGAGATTAATGATGGGCAGACATTCGATCCAACAAGACATTTCTATCATTGGCTAATGAGGTTGGAAACAAATCTGAACTTCTTCTACGCAGTGAATGTGGACGACGATTATAAGTTTAGGAGTGAAGTTTGGGTGGATGCAAGGTGCAAGGCGTCTTCTGAATACTATGGAGACTTGGTGTCATTTGATACCACATACAACACGAACCGGCATAGATTACCGTTTGCGTCTTTTGTCGGTGTAAACCACCATGGTAAGTCTACTTTGCTAGGCTGTGCTCTATTAGGCAGCAAGGAGATCCCAAGTTTCGAGTGGGTGTTCACGCAATGGTTGAAGTGCATGGGAACTGCACCGCAGGGCATCATCATAGACCAGTGCAGGTCCATATTTGGTGCAATTAGGAAGGAATTTGTGAATGGTGACGATGAAGCAGACATGTTGCATGCTGCTCTGAATGATGCACACACTAGCATCGCCACAGAGACTTCCTCCATGGTGGGCACAGAGGACATTCAAGGTCCATCAAAGGATAATCGTGTAGAATCTTGTAGAAATGTAGATTTGGATGCTCCCGCTCGGTAG 1116 0.4453 MESNVVEPVCHAPASFTDDNTTHSNDNLLNSCNVEGEKSNKLIVDHKIYLAEDEIPRVGMRFEHLKLAQDFYASYAKKVSFVSKIRNTNFDRMTKGPINQSIYCNREGFRGSRVKALTWKNTIAVMGCKARIYAKFVTEKQNWVLLKVDLRHSHPCSTKKAVHYHENSELTKHAKCVIEINDGQTFDPTRHFYHWLMRLETNLNFFYAVNVDDDYKFRSEVWVDARCKASSEYYGDLVSFDTTYNTNRHRLPFASFVGVNHHGKSTLLGCALLGSKEIPSFEWVFTQWLKCMGTAPQGIIIDQCRSIFGAIRKEFVNGDDEADMLHAALNDAHTSIATETSSMVGTEDIQGPSKDNRVESCRNVDLDAPAR* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1130 371 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 160 IPR031052 GO:0006355
Ahy20g1130 371 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 189 317 IPR031052 GO:0006355
Ahy20g1130 371 Pfam MULE transposase domain 238 317 IPR018289 -
Ahy20g1130 371 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 38 160 - -
Ahy20g1130 371 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 189 317 - -
Ahy20g1130 371 Pfam FAR1 DNA-binding domain 70 157 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1130 Ahy-Chr20 18895246 18898367 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1130 MULE 6.50E-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1130 - - aip:107620271 772.696