Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1127 ATGAATTGGAGAGTAGGAATTTTCAATCTTGCAGATTGTAGCTGTCCTTGCTGCTCAATGAAAGCTTTTGTTTATTATGGAATCGCGATTTTTCAGGAGATTGCTTTCTTCGATGTTACTCGAACGGGAGAAATCTTAAGTAGGTTGTCGGAAGATACACAGATCATAAAGAATGCCGCAACTACCAATGTTTCTGAGGCCATGAAGAACCTAGCAACAGCACTTATGGGTCTCAGCTTCATGTTTGCAACATCTTGGAAGTTAACATTGTTGGCTTTGGCTGTTGTGCCTGTAATTTCTGTTGCTGTCTGTAAATTTAGGCATTTGCTGCGTGAACTATCTCACAAAATTCAAACTGCAGCTGCAGTAGCATCTTCAATTGCTGACGTATTTCTCTTCCATCAAACCAACATTAGGAGATGA 423 0.4019 MNWRVGIFNLADCSCPCCSMKAFVYYGIAIFQEIAFFDVTRTGEILSRLSEDTQIIKNAATTNVSEAMKNLATALMGLSFMFATSWKLTLLALAVVPVISVAVCKFRHLLRELSHKIQTAAAVASSIADVFLFHQTNIRR* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1127 140 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 30 129 IPR039421 -
Ahy20g1127 140 Gene3D ABC transporter type 1, transmembrane domain 25 137 IPR036640 GO:0005524|GO:0016021
Ahy20g1127 140 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 30 129 - -
Ahy20g1127 140 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 32 128 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy20g1127 140 SUPERFAMILY ABC transporter transmembrane region 31 128 IPR036640 GO:0005524|GO:0016021
Ahy20g1127 140 Pfam ABC transporter transmembrane region 31 128 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1127 Ahy-Chr20 18661416 18662262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1127 25 129 Calmodulin-binding Proteins AT2G36910 30.189 1.93e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1127 - - aip:107621923 270.396