Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1123 ATGGATACACCAATTTTTGAAGAAGCATTGTCCGGCAGTGCGTATGACGTGAGGGAGAATTCTATTTTTACCGACGTTAATGTTCTGTGTTTGAGTGAACATGACACACCACATGTAGAACAGGTTAATGTGTCTTTTGGTGAATTTTCTTGTGATACATTGAGCCATATATTTAAGTTGAGAATGAGTGTTAATGTGTCTTTTGGTGAATTTTCTTGTGATACATCGAGCCACATATTTAAGTTGAGAATGAGTGGGAAAGAATCTGAAGACGCTATTCAGAAAAAGGATGATGCTACGGTAAGCAATAATGAGGTCCCGGATCACACTGGAATTCCAATGGAGAAAATTCCGTACGTAGGATTGAGATTTGATTCGTTACAGCGGGCACAAGAGTTCTATTCTAATTATGCGAAGAAAGTTGGGTTTGTGACGAGGATTAGGAATACAAACTTTGACAAGACCAGGAAGGAATTAAAGGTACCTATTAATCAATCGATACACTGTAGTCGTGAAGGTTATCGGGAATCTCGAGTGAAGGTAGCAATGCGGGTAAAGAGAATAACAATAGCTGGGTGCAAAGCAAGGATGTACGTGATGCTTGATAGGCATAATGATAATTGGCTGGTGACCAAATTAGAATTGAAGCACACCCACGCGTGTTCTGCCGAGCAAGCTGTGCATTACAGTGAGTACAGGGAACTGACCATGCATGCCAAGTGTGTGATTCAGAACAACGATGAGGCTGGCATACGGCCTAACAAGACTTATCTCGCACTGGCAAATGAGGTTGGTGGGTCATCAAAGTTGGGTTACTCAGAAAAGGATGTTAGAAACTATATAACGAGGAATTTGTGCTGTGCTGATGTAAACGAAGATGTGAAGGAAATGATTAGATATTTCATGCGAATGAGAGATATAAACCCGAATTTCTTCTATGCAGTTGATGTGGACGAAACTAACAAGGTTAAGAGTGCGATATGGGTAGATGCAAGATGCAGGGCATCGTATGAATATTTTGGAGATGTGGTATCATTTGATACAACGTACAGAAGGAACAAGCATGGACTTCCGTTTACATCTTTCGTTGGTGTCAACCATCACGGCAAGTCCACACTACTCGGATGTGCTTTGTTGGGTAATGAGGAAATTCCTAGCTTTGAGTGGGTCTTTAAAAACTGGTTAAATTGCATGGGAAATTCCCCACAAGCCATCATCACGGACCAGTGCAAATCCATATTTGGCGCAATTAAGAATGTCTTCCCAAATACTAGACACCGATGGTGTATATTGCACATAATGAAGAAGATACCACATAAGCTCAGAGGATATGCTAAATACAGAGAAATAGATGATAAAATGCATGGCACTGTTTGGAATGCCCGTTCTGAAGAGTCTTTTGAGAAAGATTGGTTTGTGCTTTATAGTGATCTTGTATTATTTTTGGATGGTGGGTATGTTTGGAAGACCTTTACGAAGATCGGAGAATGTGAGTTCCAATATATTTCCAAGGTGAATTTTGGGCTGTTCGTGCATGAGTATGATAATGTGCTTGGGAACAAAAAGCAAAAAGAACTGGAGGATGATGCTGCAGACTCTAAAGGAGTTGTTCCATGTTCATCGAGCTCTACAATTGAAAGACAATTTCAGCGTGAGTACACAACCTCTAAGTTTAGAGAAGTCCAACATGAATTCAGTAAAAGAGGGGATTGTTTAGTCTGTGGGGTCACTCAAGAGGGTGATTTGTTTCGGGTGACCGTCAACGAGCAATACCTATTGTATGGGGAGCCCAGATCTTGGAAGTACAGTGTTGAGTTTGACTCCAAGACACACAAGATTCGGTGCGAATGCAACATGTTTGGCTCAAGAGGTATTATTTGTTGCCACTGTCTTGCTGTGTTGTTTTATTATGGAGTAGACACAGTACCATCTTGCTATGTTATCCATCAATGGAGCAAGAATGTACAGCGAAAACACACCTTCATCAAGAGCAGCCATGATGAGAAGCGATCGGATGAAAGCCACAACTTATTTAGACGACTGTGTTCACACTTCTACAATGTAGCACAAGATTTTGTGACATGTGAAGAAGAAGCGGCCATGTTACATTCGGGTCTTGATCAGTTAAGGTCAAAGTTGCTTGACTGTCGTGCGAACTTGCTGTCCAGGCGTGTTCCAAGTTCACAAAATAGCACGGTCACACAGGGCGACCCCCATCTTGGTGAATCTGACATCCAAGGTCCTTCAAGGGTTTCAACGAAGGGTCGGCCGAGAATGAAGAGGCTTGGATCTGAACTCGACGCCTCAATCAAGAACTCTATGCGAAGAAAAAAGAAGAATCCACCGCTGGATGTTCATCAAGCATTGAATCAAGATGTAGCGAGTTGTTCTGCTAGGAGAGCGAATGAATCACAGGAACATGGCGGGTTCCTGTCGTTGTTAAACTCATTTCGGCCTACTTAA 2463 0.4202 MDTPIFEEALSGSAYDVRENSIFTDVNVLCLSEHDTPHVEQVNVSFGEFSCDTLSHIFKLRMSVNVSFGEFSCDTSSHIFKLRMSGKESEDAIQKKDDATVSNNEVPDHTGIPMEKIPYVGLRFDSLQRAQEFYSNYAKKVGFVTRIRNTNFDKTRKELKVPINQSIHCSREGYRESRVKVAMRVKRITIAGCKARMYVMLDRHNDNWLVTKLELKHTHACSAEQAVHYSEYRELTMHAKCVIQNNDEAGIRPNKTYLALANEVGGSSKLGYSEKDVRNYITRNLCCADVNEDVKEMIRYFMRMRDINPNFFYAVDVDETNKVKSAIWVDARCRASYEYFGDVVSFDTTYRRNKHGLPFTSFVGVNHHGKSTLLGCALLGNEEIPSFEWVFKNWLNCMGNSPQAIITDQCKSIFGAIKNVFPNTRHRWCILHIMKKIPHKLRGYAKYREIDDKMHGTVWNARSEESFEKDWFVLYSDLVLFLDGGYVWKTFTKIGECEFQYISKVNFGLFVHEYDNVLGNKKQKELEDDAADSKGVVPCSSSSTIERQFQREYTTSKFREVQHEFSKRGDCLVCGVTQEGDLFRVTVNEQYLLYGEPRSWKYSVEFDSKTHKIRCECNMFGSRGIICCHCLAVLFYYGVDTVPSCYVIHQWSKNVQRKHTFIKSSHDEKRSDESHNLFRRLCSHFYNVAQDFVTCEEEAAMLHSGLDQLRSKLLDCRANLLSRRVPSSQNSTVTQGDPHLGESDIQGPSRVSTKGRPRMKRLGSELDASIKNSMRRKKKNPPLDVHQALNQDVASCSARRANESQEHGGFLSLLNSFRPT* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1123 820 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 86 472 IPR031052 GO:0006355
Ahy20g1123 820 PANTHER OS03G0843700 PROTEIN 86 472 - -
Ahy20g1123 820 PANTHER OS03G0843700 PROTEIN 504 679 - -
Ahy20g1123 820 MobiDBLite consensus disorder prediction 727 785 - -
Ahy20g1123 820 Pfam MULE transposase domain 343 436 IPR018289 -
Ahy20g1123 820 Pfam FAR1 DNA-binding domain 132 221 IPR004330 -
Ahy20g1123 820 ProSiteProfiles Zinc finger SWIM-type profile. 602 638 IPR007527 GO:0008270
Ahy20g1123 820 Pfam SWIM zinc finger 612 637 IPR007527 GO:0008270
Ahy20g1123 820 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 504 679 IPR031052 GO:0006355
Ahy20g1123 820 MobiDBLite consensus disorder prediction 758 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1123 Ahy-Chr20 18442158 18446841 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1123 MULE 7.60E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1123 - - ahf:112785545 1694.48