Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1096 ATGTCAACAAGAAGGAGTAACATAGGCGCGTGGGCCGCCGATGCTGAGCGAGCAGAGGAGGAGGAGCAGGAGGCTGCGGCCGCCGCGGCCATTGCCGGAGGTAGTGGAGACGCCAGATCGTTTGACTTCCCGAGCCTGAAGGAGGCCGTGAGCACCAAGCCCAAGAAGAAGAAGATGTCGCTCATGGAGTTCAACAACTCCGCCGGCAGCGGTGGTGGTGGCGGGGGATTCGCGAGGGAGCAGAGGGGCTTAACGCCAGACGAGATGCTCCGCCTCCCGACAGGGCCTAAGGAACGCTCCGCCGAGGAAATGCAGTACGGCCGCGGGTTTTCTAACTACGGAGGCGGCCGCTCTGTCCCGCCGCCTGGCCGAGGTCTGGACCGTAACGACGGCGACGGTTCCTGGGGCGGAGGGAGGAGATCCTATGGCGATTTCGATGAAGAGCGCAGGGGCGGTCCTCGTTCTAGGGTTTCGGATTTCGATCAACCTTCGAGGGCCGACGAGGTGGACAATTGGGCTTCGTTGAAGAAACCGGTTCCGGCATTCGATTCCGGTCGGCAAAACCGGTACGGCTCTCTCGGCGGTGGAGGTGGCAGTAGTGGTGGCAATGGAGATGGTGGTGTTGGTGGTTCTAGGGCGGATGAAGTGGATAATTGGATGGCTGGTAAGAAGTCTCTTCCTGTTAGATCTTCCACGTTTGGTTCTGGGTTCCGCGATTCAGGTCCAGAGCCTGATCGCTGGACACGTGGCAAGCGTGACACACGTGACTTACGTGACAGCGATCGGGAGCGGCCGATATTGGTGCTGGACCCGCCGCAAGGCAACGGTTCCGTGAACGAAATGGAGGCAGTGGTGAAGACGAACAAGCCGAACCCTTTTGGCGCAGCGAGGCCAAGGGAGGAGGTTTTGGCGGAGAAGGGATTGGATTGGAAGAAGCTCGATTCGGAGATTGAATCAAAGAGGCCTATAAGTGCACACTCCAGCAGGCCCTCCAGCGCGCAATCGAGTTGCTCCGAGGGGCCTGCCGGGTTGCAGGTGAAGCCGAAGGTGAATCCCTTTGGGGATGCCAAGCCTAGGGAGGTTTTGCTGGAGGAGAAGGGAATGGATTGGAAGAAGATTGATCTTGAATTGGAGCATCGCCGTTTTGATAGGCCAGAAACAACCGAGGAAAAATTGCTGAAAGAAGAAATTGATAACTTGAAGAAGGAACTTGGGAAAGAGTCTGAAGCAAATTCAAATAAGATTTCTAGTGATGAAGTAGACACAACCAATAAAGAATCAATGTTACTTCAGAAAGAAAGGGAGCTGGAAATTCTTACCCGTGATTTAGATAACAAAATTCGATTTGGGCAAAAAGCCATTGAAGGTCCAGGCTCGGCAATAGGAAGGACTACTGGTTTTCCTGATAGACCGCCTTCTCAATCTGGCACGTTTGAGGATTCTAGAAGTGTTGATTCTGCAGACAGACCTCGATCCCGTGGCACAGGAGATATGTGGCCACGTTCTAATGAGGGCAGAGGACCGTTACGTTCTAACGAGGACAGAAGACCATTACGTTCTAACGAGGACAGAGGACCATTTCAAGGTAGCAGGGACAGAGGATGGTTTCAGAATAGCAGAGACTTAGATAGGTCCAGGTCAAAAGAGAGGTGGTGA 1656 0.5435 MSTRRSNIGAWAADAERAEEEEQEAAAAAAIAGGSGDARSFDFPSLKEAVSTKPKKKKMSLMEFNNSAGSGGGGGGFAREQRGLTPDEMLRLPTGPKERSAEEMQYGRGFSNYGGGRSVPPPGRGLDRNDGDGSWGGGRRSYGDFDEERRGGPRSRVSDFDQPSRADEVDNWASLKKPVPAFDSGRQNRYGSLGGGGGSSGGNGDGGVGGSRADEVDNWMAGKKSLPVRSSTFGSGFRDSGPEPDRWTRGKRDTRDLRDSDRERPILVLDPPQGNGSVNEMEAVVKTNKPNPFGAARPREEVLAEKGLDWKKLDSEIESKRPISAHSSRPSSAQSSCSEGPAGLQVKPKVNPFGDAKPREVLLEEKGMDWKKIDLELEHRRFDRPETTEEKLLKEEIDNLKKELGKESEANSNKISSDEVDTTNKESMLLQKERELEILTRDLDNKIRFGQKAIEGPGSAIGRTTGFPDRPPSQSGTFEDSRSVDSADRPRSRGTGDMWPRSNEGRGPLRSNEDRRPLRSNEDRGPFQGSRDRGWFQNSRDLDRSRSKERW* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1096 551 MobiDBLite consensus disorder prediction 242 266 - -
Ahy20g1096 551 MobiDBLite consensus disorder prediction 536 551 - -
Ahy20g1096 551 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 551 - -
Ahy20g1096 551 MobiDBLite consensus disorder prediction 324 341 - -
Ahy20g1096 551 MobiDBLite consensus disorder prediction 319 355 - -
Ahy20g1096 551 Coils Coil 390 410 - -
Ahy20g1096 551 MobiDBLite consensus disorder prediction 507 529 - -
Ahy20g1096 551 MobiDBLite consensus disorder prediction 450 551 - -
Ahy20g1096 551 Pfam Plant specific eukaryotic initiation factor 4B 1 514 IPR010433 GO:0003743
Ahy20g1096 551 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 551 IPR010433 GO:0003743
Ahy20g1096 551 MobiDBLite consensus disorder prediction 402 425 - -
Ahy20g1096 551 MobiDBLite consensus disorder prediction 1 278 - -
Ahy20g1096 551 MobiDBLite consensus disorder prediction 141 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1096 Ahy-Chr20 17551517 17556636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1096 43 551 Eukaryotic Initiation Factors Gene Family AT3G26400 50.923 9.05e-132 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1096 - - adu:107469131 657.907