Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1036 ATGGCTGCTCTGCTAAGAGGAGGAACAATAGGTCATGTCAAGGATACTAAAGTTTGGATCCGAGAAGAGTATCGACGATTGGAGAACGAGTCCTTCTCAACTTTTGTGGATAATCTCCCAGAAGACATATCAAAGAGAGAACTGTTTCAACTGTTTAGTTGGACTGGATGCATAAATGACATATACTTATCGAGAAAACAAAAGAATGGGGGTATATACATTTTTGTGTTTATACGATACACAACAAAAGGAGGGGCCTTGAAGGCTACAACAGAGATGAATCGTATGAGATTGAGAGGCAAGGTTATTTTTGTGGGGAAAGCTAAATACAAGAGAAGTTCCGAGGTAAAAGACACGAGTAAGATCCATCACAGAGGTGATACTCGAAATGTTATGGCTCGTCAAATGCTACAAGAAAGAGAAGAGACCCAGAAAATCTCAGCTATCTCCAATAAATATTTGACGAAGGAGAAAACAGTTCAAGATCCACATGGAAATGGGTGGACAAAGAAGGTGGAAGTGGTTGTCACGAAAGAAAACTTCGTCTAG 549 0.4007 MAALLRGGTIGHVKDTKVWIREEYRRLENESFSTFVDNLPEDISKRELFQLFSWTGCINDIYLSRKQKNGGIYIFVFIRYTTKGGALKATTEMNRMRLRGKVIFVGKAKYKRSSEVKDTSKIHHRGDTRNVMARQMLQEREETQKISAISNKYLTKEKTVQDPHGNGWTKKVEVVVTKENFV* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1036 182 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 103 IPR000504 GO:0003723
Ahy20g1036 182 Gene3D - 25 147 IPR012677 -
Ahy20g1036 182 SMART rrm1_1 33 106 IPR000504 GO:0003723
Ahy20g1036 182 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 110 IPR000504 GO:0003723
Ahy20g1036 182 SUPERFAMILY RNA-binding domain, RBD 30 113 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1036 Ahy-Chr20 15702232 15702876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1036 21 165 Eukaryotic Initiation Factors Gene Family AT1G22760 26.115 3.75e-07 47.4