Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1007 ATGGAACGCTCAAATCCGGAAGGGAAACCAAATAGCACAGTGATCAATGCTAGTGAAGGCAATGATGAATTGAATGACGATGGCGTTGTTAATCAAGAGGGTTCCTTGGTCGACGAAATCACCGACGTCATGGTGATGAGAAATGATGAGTTGGATTTAAGACACGAGTTGCCGGATCATAGTGGGCTCAGTGAAGCGGAAATTCCAGTCATAGGAATGAGTTTTGATTCGCTGCCTTTGGCACAGGAGTTTTATGCAAATTATGCAAAGAAATTGGGGTTTGTAACTAAAGTCAGGAATACGAACTTTGACAAGACGCGGAAGGACGCAAAGATACCCATTAATCAATCTCTTCACTGCACTCGAGAGGGTTATCGAGAATCTCATGTTAAGGTAGCAACTCGGTCAAACAGAATAACAGCCACGAGATGCAAAGCAAGAATGTATGTCATGCTGGACAGGGAGAAGGAATCTGAGAAAGCTGTCCACTATCATGAGTACCGGGAGCTGACCAAGCATGCCAAGTACGTCATTACAGATAACGACGAGGCTGGCATAAGACCCAACAAGACGTATCTAGCACTGGCAAACGAAGTTGGTGGGCCTTCAAAACTGAGTTTCTCAGAAAAGGATGTCAAAAATTACATCACACGTAATCTCCGATGCTCCGATGACAATGAGGACTTCCAAGGGATGATGAATTATTTCGTTCGAATGAAGGAGATCAATCCCAACTTCTTTTATGCCATAGATGTTGATGATGATAATAAATTTAAGAGTGCACTCTGGGTAGATGCAAGGTGCAGGGCTTCGTATGAATATTACGGAGATGTGGTGTCGTTTGACACCACATACAGAAGAAACAGGCATGGTCTACCATTTGCATCCTTTATCGGTGTAAACCACCATGGGAAGTCTACTCTTCTTGGCTGTGCTTTACTAGGCAATGAGGAGATCCCTAGTTTCGAGTGGGTGTTCACGCAGTGGGTGAGATGCATTGGGACTGCGCCAAAGGGGATCATCACTGACCAGTGCAAGGCAATGGCTGGTGCTATAAGGAAGGTCCTACCTGATACTGTCCACAGATGGTGCATTTGGCACATAATGAAGAAAACACAATTCAAGCTCGGTGGCTACACTAGGTACGGAGAATTGAGTGCAATGATGAATCACATTGTGTATAACTCTCCTTCGAGTGAATCGTTTGAAGTTGATTGGGCTGCTTTCATCAAAGAATTTGCGTTAGGCCAGAACAGATGGTTAGCAGGTCCGTGA 1275 0.4463 MERSNPEGKPNSTVINASEGNDELNDDGVVNQEGSLVDEITDVMVMRNDELDLRHELPDHSGLSEAEIPVIGMSFDSLPLAQEFYANYAKKLGFVTKVRNTNFDKTRKDAKIPINQSLHCTREGYRESHVKVATRSNRITATRCKARMYVMLDREKESEKAVHYHEYRELTKHAKYVITDNDEAGIRPNKTYLALANEVGGPSKLSFSEKDVKNYITRNLRCSDDNEDFQGMMNYFVRMKEINPNFFYAIDVDDDNKFKSALWVDARCRASYEYYGDVVSFDTTYRRNRHGLPFASFIGVNHHGKSTLLGCALLGNEEIPSFEWVFTQWVRCIGTAPKGIITDQCKAMAGAIRKVLPDTVHRWCIWHIMKKTQFKLGGYTRYGELSAMMNHIVYNSPSSESFEVDWAAFIKEFALGQNRWLAGP* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1007 424 Pfam FAR1 DNA-binding domain 83 154 IPR004330 -
Ahy20g1007 424 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 422 IPR031052 GO:0006355
Ahy20g1007 424 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 47 422 - -
Ahy20g1007 424 Pfam MULE transposase domain 278 371 IPR018289 -
Ahy20g1007 424 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1007 Ahy-Chr20 14809336 14811527 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g1007 MULE 1.90E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1007 - - ahf:112763810 696.812