Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1001 ATGTGGGCAGCCCTACAAGCTCGAGCATCAGTTTCGTCGTGGTGGCTTTCTTCACGGCAATGGAAGCTAGCATTTTCGTCTTCCTCTTCTGCCGTTGGAAAATGCACCCTTGATCTTCACGAGATTGAGAAGGTTCTAACGGATGTTAAAGCTGACGACGTTAAGGTTATACCGTCTCCCAAGTACTGTGATTGGGCTGATTTCATGGTTCTAGCAACCGGCAGGTCCACGTGGTATGTCAAGAACATCGCTCAAGCTCTAATTTACAAGGCTAAGCAGAAGCAAAAAGGTGCAGACCGAATGATGCTACCTAGTGTGGAAGGTCAAGCAGGAGGAAAGTGGATTGTAATTGACTCTGACAGCGAGTGCTTGATTCCTTCTTTTTCAAAGTCCAAGTTAGCAGACATCTTTGACCTCGCATCCAAGCTATCAGTACAACAAGCAATATCGTCGTTGCCGCTCATATGGAAACTGAAGCGATTACTGAACATTAGTTCAGAGAAGAAACTGAAGGAAGCGATTGGAGTGGTGGACAATGTGTTTGAAATTACAGTGTTAGACTGCTAG 567 0.455 MWAALQARASVSSWWLSSRQWKLAFSSSSSAVGKCTLDLHEIEKVLTDVKADDVKVIPSPKYCDWADFMVLATGRSTWYVKNIAQALIYKAKQKQKGADRMMLPSVEGQAGGKWIVIDSDSECLIPSFSKSKLADIFDLASKLSVQQAISSLPLIWKLKRLLNISSEKKLKEAIGVVDNVFEITVLDC* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1001 188 SUPERFAMILY Nucleotidyltransferase 40 119 IPR043519 -
Ahy20g1001 188 Pfam Ribosomal silencing factor during starvation 41 122 - -
Ahy20g1001 188 PANTHER IOJAP SUPERFAMILY ORTHOLOG 22 120 IPR004394 -
Ahy20g1001 188 Gene3D Beta Polymerase, domain 2 37 137 IPR043519 -
Ahy20g1001 188 PANTHER MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1 22 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1001 Ahy-Chr20 14639887 14641686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1001 120 180 Cytochrome P450 AT2G27690 49.180 5.40e-12 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1001 20 14639887 14641686 Ahy20g1001 20 14639887 14641686 ECH