Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0996 ATGCATACAATTAACTTAATTGTTAGAATTAGCTGGACACTCAATATTTGGTTATCAACTATTACTGCCGCCCTATTCCTCCCCTTGTCCTCCGTCGCAATCGTACTTCTTCCTCCCCTTCCCCTCCGTCGCAATCGCACCCTCTTCCTCCCTTTTCCCTCCATCGCAATAACGTCCTCTTACTCCCCTTCCCCTCCGTCGCAATCGCGTCCTCTTCCTCCTCTTCCCCTCCGTCGCAATCGCACCATCCCTTTCTATCTCCACCACCGAGAACGACTGAAGCCTCCCCACTCAGATAACTTCTTCTCCCCCCCCCCACTTAGTGTTAACGAGTCTGTTCAGGTGGATCCAAGCCCACGAACAGCCTCACCTCTGACGACGACGAAGCCTGATCTGCATTGTCGGACTGCAATTTTCTTTGGAGGACATCCCCCAATTTTGTGTGTTTCGCTAAATCACCGCATTGTTGCTGTTTGGCACAGGGTTGCCGGGGATGAAGATACCACTGGGGGCGTGCACGTCGCCGATGAACCAGAAATGTCTGACGGAGCAGAGCACGGAGTTGGATCGTTTGAGGGCGAAGGCTCTGCACGGATGGAGTCGGACAAGTACGACTTTCAGGAAGATGAAACAGAACACGACCATCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACAGTTTGGACGGCGCCGGAGGAATGTCTGACAATTATGCGGAAGACGAGTTTTACACTGTTGATTCCGTGGAGTCGATAGGTTGGATTGATTTTTTGAACTTGAGCAAGGAGGATATTTTCCGGTTTAATTTCGCAGACGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGGGCGAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACTCGATGCCTAACCGGAAAAAGAGGCCGAGGGCCGAGACACGTTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGGCTCGTTGCGTACTTTTCAGACGTGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTTCCAGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCTACGGTTTTATGGTGAGCCTAGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGATGCGGAATCATGCCTAAGGTATCTCCGAGAGTGCAAGACAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAACATTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTGTTTGGATACGTGGTTGCATTTGATGTAACGTACAAGAAAAACGTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATCACCACAGCCAAACGGTTGTCTTTGCCACCGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGTTTCAACAGTTGCAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGACGGTGACAGGCAAATGAAGTCTGCGATCGAGCAAGTTTTTCCGGAGGCTCACCATCGACTCTGCGCTTGGCATCTACTCCGAAACGCCACGAGCAACATCGGAAAGCCCAAATTCACCAGGATGTTTAGGGATTGCATGCTTGGCGACTACGAGGTCCGAACATTCGAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTCGCCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAGTTGGGCCACAACACACATACGGGGAAAGTTCTTTGCCGGATTTCGAACAACGTCAAGGTGCGAGGGCTTGCACGCTGTGATATCACGGTATGTTAAGTCTCGATACAGCTACACTGAGTTTTTACGTCATTTCCAGCGATGCTTGATGTTTGTGCGTGCAAAGGAGGTGGAGGCTGATTTCGAGTGTGCAAAGGGTGACCCTGTTATGACCACCAACCTGAAACAGCTGGAGCGGAGTGCAGCCGAGAACTACACTCGTGCAATATTCTATTTGTTTGTTCCCATTCTTAACAGGGCCTGTGTAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATCCACACCGTCTCTCGATACGGCACTCCGGGGAAGGATTGGCGTGTTGTTGCAACGTCTGATACGAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCCCTACGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCTCTGATATTGCCGAGATGGACCAAGGATGCAAAACTTGTGGCGGTGCAGTCGATGGGCGTGATTTGGGATTCTGTGCAACTGACGCAACACTGGTGCCTGATGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAGCACTGAAAAGTTCTAG 2592 0.5058 MHTINLIVRISWTLNIWLSTITAALFLPLSSVAIVLLPPLPLRRNRTLFLPFPSIAITSSYSPSPPSQSRPLPPLPLRRNRTIPFYLHHRERLKPPHSDNFFSPPPLSVNESVQVDPSPRTASPLTTTKPDLHCRTAIFFGGHPPILCVSLNHRIVAVWHRVAGDEDTTGGVHVADEPEMSDGAEHGVGSFEGEGSARMESDKYDFQEDETEHDHHAEADVDNGDAVELEDSLDGAGGMSDNYAEDEFYTVDSVESIGWIDFLNLSKEDIFRFNFADVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGYRSPKFYSMPNRKKRPRAETRCGCPARMLLRMDDESGRWLVAYFSDVHNHHVLELRFSSMLPGHRRMSEADIEQMNDMRKGGIGVSRIYGFMVSLAGGYHNVPYTTRDMHNVNAKQRREGGLDAESCLRYLRECKTNDPALYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGYVVAFDVTYKKNVYLSPLVVFSGVNHHSQTVVFATALVADEKEETYVWLFQQLQTSMKGKAPVSIITDGDRQMKSAIEQVFPEAHHRLCAWHLLRNATSNIGKPKFTRMFRDCMLGDYEVRTFERKWFEMVEKFGVADKRWVQDMYERRHSWATTHIRGKFFAGFRTTSRCEGLHAVISRYVKSRYSYTEFLRHFQRCLMFVRAKEVEADFECAKGDPVMTTNLKQLERSAAENYTRAIFYLFVPILNRACVMRVVDSEDNGSYFIHTVSRYGTPGKDWRVVATSDTREVRCTCMRMECFGVPYEHIIAVLVLNNVHEIPRSLILPRWTKDAKLVAVQSMGVIWDSVQLTQHWCLMDWYRKVCKIACHSTEKF* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0996 863 ProSiteProfiles Zinc finger SWIM-type profile. 769 805 IPR007527 GO:0008270
Ahy20g0996 863 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 269 858 IPR031052 GO:0006355
Ahy20g0996 863 PANTHER OS02G0262500 PROTEIN 269 858 - -
Ahy20g0996 863 Pfam MULE transposase domain 492 586 IPR018289 -
Ahy20g0996 863 MobiDBLite consensus disorder prediction 167 183 - -
Ahy20g0996 863 MobiDBLite consensus disorder prediction 196 223 - -
Ahy20g0996 863 MobiDBLite consensus disorder prediction 167 236 - -
Ahy20g0996 863 Pfam FAR1 DNA-binding domain 283 372 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0996 Ahy-Chr20 14548061 14550763 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g0996 MULE 1.70E-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0996 - - aip:107647116 1352.04