Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0993 ATGGAAACGAGTCCCGGCCGTACGATTAAGCTCCTCTGCAGCTACGGCGGCAAGAACCTCCCACGCGCTACCGACGGCGGGATCCGTTTCATCGGTGGCCACACTAGAGTCACCGTGGATCACTTGTTGGTAAAGGTAGGAGCGTTGTGCGGTTCGTCTGTGACGTTCTGGTGTCAATTGCCGAACGAAGACTTAGAAACCTTGATCTCCCTCACCAACGACGAAGATCTGACGAACATAAGCAAAGAATATGACCGAGCTTCGTCGAAACTACCTCATCCGTTGAATACCAGAGCCGTGCTGTTTCGGCCAGAAACGTCGAAGAAGGTTTCTCCGGCAACGTCATCTCCGTTGAAGAAGTTGAAGATGGCACTTAACATAATCCGAAATATTTAA 396 0.5076 METSPGRTIKLLCSYGGKNLPRATDGGIRFIGGHTRVTVDHLLVKVGALCGSSVTFWCQLPNEDLETLISLTNDEDLTNISKEYDRASSKLPHPLNTRAVLFRPETSKKVSPATSSPLKKLKMALNIIRNI* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0993 131 PANTHER PB1 DOMAIN PROTEIN 6 118 - -
Ahy20g0993 131 Pfam PB1 domain 36 90 IPR000270 GO:0005515
Ahy20g0993 131 SUPERFAMILY CAD & PB1 domains 28 108 - -
Ahy20g0993 131 PANTHER OS05G0427100 PROTEIN-RELATED 6 118 - -
Ahy20g0993 131 SMART PB1_new 23 100 IPR000270 GO:0005515
Ahy20g0993 131 Gene3D - 25 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0993 Ahy-Chr20 14523939 14524450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0993 9 90 MAP Kinase Kinase Kinase AT1G04700 46.067 2.60e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0993 - - aip:107611558 229.565