Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0950 ATGAACAACATAAACCAAGAGGCGATATCAACGTCAGCCAATCATGAATCGGCGGTGCCAGAGCCGGAGGACGGGATTTTGAATGAGGAAACACTTTTTGACATGAGCATGTTAGGGGACGAAGAAGGGTTTCCGAATATGACGCAGACAAAGGTGGAGCCTGAATCTGCTCAGGTACCAAGTCATGTCAGCGTTGAAGATGTGCTGAAGATGGAGTTCTTTACCCCTGGGGAAGCAAGGGAATTCTACACGAGTTATAGTAGGTTAAAAGGTTTTGCAATAAGGAACAGTAAGACGGTAAAAAATGCTAAAGGAGATATCGTTAGATACAATTTTGTTTGCAACAGAGAAGGATTTAGGCAGAAGAAGTGGTTAGATAAGCCCGATAGGAAAAGAGAGTACAAGCCTATAATGCGATGTGGGTATGTAGCAGAGATGAGGATAAAGAAGAATCATGGTAATGGAAAATGGTATGTTTCACAGTTTGTGGATGATCATAACCACACCCTACTCCCAGAAAGGTTTATTGGATATCTGCCTTCACACAGGAATATGTCTGATGTAGAAATTGCTCAAATGAATAGCATGCGGCAAGTTGGGATAAGCATTCCGAAGATATACCAGTCATTTGCGATGCAGAGCGGAGATGTGAATGCCGCGCTACGTTTCTTCGAACATGCTGCCAGAAACGATGAGAGACTGTTTTGGAGGTATGAGGTGGCGGCTGGTTCTCGCATGTGTGACATTATATGGAGTGATGGTCGAAGCCAGGAAGATTATGAGGCGTTCGGTGATGTCCTCGCCTTTGATGCGACCTATGGGAGGAACAAGTATAACTTGCCGGTTATTGTTTTGTCCGGTGTTAATCACCATAATCAGACATGCGTGTTTGCAGCAGCAATGGTTTCATGTGAGTCACAGGATTCGTACAAATGGGTGCTGAGACGGTTTCTAGAATGCATGCGGGGAAAGGCCCCGAAGGCATTTATAACTGATGGGGATCCTTCTATGAGGCTAGCTATTATGCATGTATTTCCAGATGCTCATCACAGACTATGCGCGTGGCACCTACTAAGGAATGCCACTGCTCATGTCTCGCAACCACGTTTCACACAGTTATTCAAACAGTGCATGCTCGCTGACATAGAGGTTCATGAATTTGAGAGGCAGTGGGAGGCGATGGTTGGGGAGTGTGGTGTTCGAGAGGTTGAATGGGTGATGGACCTCTATAGTAAGAAGTTGTCATGGGCAACCGCGTACATACGGGGCAGATTCTTTACAGGTTTAAGGACAACCTCTCGGTGCGAGTCGTTGCATGCTAAGTTGGGTGGGTTTGTGGAGAGTAGATATGGGATATTGGACTTTATTACAAATTTTCAGAGATGTGTTGATTTCCTAAGAGACAAGGAGGAGGAGCTTGACTTTCGTTCCTTTTACGGTACCCCGGTGCTTCAAACGCACTTTCAAGAGATTGAGAGGTCAGCGGCGACCCTGTATACCCGTGAAGTATTTTATAGATTTCGAGAGACCTTAAAGCGGGTTGTGAGATTTAACATTATCGACCGGGAGGATTGTGAAAACGGATGCTGCTACGTGATACAAAAGTATCGCCGACCGGAGTCAACTTGGCAAGTGTTGCACCAGCCGCAGAATGGAACCTTTGAATGTAATTGCCACAGGATGGAGTCATATGGGATCCTTTGTGTTCACATAATTTTTGTTCTGGTAGGTATTGATATCGGTTATTTGCCCGAGACTCTGGTCCTCAAGAGGTGGTGCAGAAACGCCAAGAACAATGTGACTTTCGTTAGACAAGTTACTGAAACGGGTGATGCTGCATCCCGGTACCACAGCAGACTTGGTGCATTTGTAGACCAATGTAAGCGTTTGGCTAAGGTGGCTTGTCTAAGGGAGGAGGACTACAAGGTATATAGCGAGAAAATGGCACGGGATGTTGTCATGTTGGAGGTCAAGAATGGGTTGCGTGTCGCCGCAGATGTTAATACACAGCCTAACGGTGAGGGCGGTGGTGGGATAAATGATCCAGTCCGCGTCCGAACAAAAGGCACCGGTAGAGGAAACGTTTCTCAGCGAACCAAGGGACCGAAGAAGAGAAAATGCAGCGCCTGCGGAAAACTGGGTCATCGCCGAACTCGCTGCCCCATTGGGGCAGACCTGCGCCCGGGATGTCGTGGATCGCAACGGGTTCCCAAGGGTCGGCAAGCTGAAGCTCAGGCGACACCGTCACAGACGACTAGACCAGATCACTTGAACTGTTTTGCCTCTGAACTTGCAACGGGTCAGCAGGAGCTCCAGATGGGGGCGGGCACGAGGAAGAGGAAACTAAGGGTTGAGCTTCCAAATACATTCCCGCAATTCATGTCATAG 2388 0.4749 MNNINQEAISTSANHESAVPEPEDGILNEETLFDMSMLGDEEGFPNMTQTKVEPESAQVPSHVSVEDVLKMEFFTPGEAREFYTSYSRLKGFAIRNSKTVKNAKGDIVRYNFVCNREGFRQKKWLDKPDRKREYKPIMRCGYVAEMRIKKNHGNGKWYVSQFVDDHNHTLLPERFIGYLPSHRNMSDVEIAQMNSMRQVGISIPKIYQSFAMQSGDVNAALRFFEHAARNDERLFWRYEVAAGSRMCDIIWSDGRSQEDYEAFGDVLAFDATYGRNKYNLPVIVLSGVNHHNQTCVFAAAMVSCESQDSYKWVLRRFLECMRGKAPKAFITDGDPSMRLAIMHVFPDAHHRLCAWHLLRNATAHVSQPRFTQLFKQCMLADIEVHEFERQWEAMVGECGVREVEWVMDLYSKKLSWATAYIRGRFFTGLRTTSRCESLHAKLGGFVESRYGILDFITNFQRCVDFLRDKEEELDFRSFYGTPVLQTHFQEIERSAATLYTREVFYRFRETLKRVVRFNIIDREDCENGCCYVIQKYRRPESTWQVLHQPQNGTFECNCHRMESYGILCVHIIFVLVGIDIGYLPETLVLKRWCRNAKNNVTFVRQVTETGDAASRYHSRLGAFVDQCKRLAKVACLREEDYKVYSEKMARDVVMLEVKNGLRVAADVNTQPNGEGGGGINDPVRVRTKGTGRGNVSQRTKGPKKRKCSACGKLGHRRTRCPIGADLRPGCRGSQRVPKGRQAEAQATPSQTTRPDHLNCFASELATGQQELQMGAGTRKRKLRVELPNTFPQFMS* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0950 795 MobiDBLite consensus disorder prediction 725 753 - -
Ahy20g0950 795 Pfam FAR1 DNA-binding domain 81 172 IPR004330 -
Ahy20g0950 795 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 47 647 - -
Ahy20g0950 795 MobiDBLite consensus disorder prediction 668 708 - -
Ahy20g0950 795 ProSiteProfiles Zinc finger CCHC-type profile. 705 721 IPR001878 GO:0003676|GO:0008270
Ahy20g0950 795 ProSiteProfiles Zinc finger SWIM-type profile. 543 579 IPR007527 GO:0008270
Ahy20g0950 795 MobiDBLite consensus disorder prediction 1 22 - -
Ahy20g0950 795 MobiDBLite consensus disorder prediction 1 17 - -
Ahy20g0950 795 Pfam MULE transposase domain 266 360 IPR018289 -
Ahy20g0950 795 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 647 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0950 Ahy-Chr20 13106935 13110174 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g0950 MULE 3.70E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0950 - - ahf:112785456 1643.63