Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0924 ATGGGAGCCATCCGATATGTTCCACCAGCCACCAGGAATGATTTCAAGGCCATAGTGTTTGAGTTCATGTCTAATGGGAGCCTAGAAACTTTGTTGCACAACACTATTGAAGATAGCGAGTTCACAAATATGAGTCTGAACCTTATGCAAAGGGTAAATATTGCTCTTGATGTAACTTTTGTGTTGGATTATATTCATAATGATTCAGGAGAAGCCGTAATTCATTGTGATATTAAGCCTGGCAATGTGCTTCTTGATGATGATATTGTTTTCCACTTGGGAGACTTTGGTCTAACTAGACTTGTTCAGTTGTTCAAGGGGACAAAAACTATTCTACTAGTAATCATGGTAGTTCCTCTATAA 363 0.3829 MGAIRYVPPATRNDFKAIVFEFMSNGSLETLLHNTIEDSEFTNMSLNLMQRVNIALDVTFVLDYIHNDSGEAVIHCDIKPGNVLLDDDIVFHLGDFGLTRLVQLFKGTKTILLVIMVVPL* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0924 120 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 12 107 - -
Ahy20g0924 120 Pfam Protein kinase domain 11 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0924 120 SUPERFAMILY Protein kinase-like (PK-like) 10 108 IPR011009 -
Ahy20g0924 120 Gene3D Transferase(Phosphotransferase) domain 1 4 113 - -
Ahy20g0924 120 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0924 120 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 12 107 - -
Ahy20g0924 120 ProSitePatterns Serine/Threonine protein kinases active-site signature. 73 85 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0924 Ahy-Chr20 12212238 12214185 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0924 13 105 Receptor kinase-like Gene Family AT3G47570 50.000 1.16e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy20g0924 Pkinase 5.50E-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0924 - - ahf:114924118 240.736