Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0908 ATGAAGAAGGTTATGGTAACTATGATGATGGTGATGATGATGGTGTCTATAACCATGGCAGCACCTTCACCTTCACCTTCTCCTTCTTCTCCTTCAACATGCCCCATCGACTTTAGCTATGTAAAGAGAGTTCCATGGAACCCTTCAGCATGTGAGAATTTCCACTCTTTATCATCAAACTTGAGCAACTGTTGCACCTCGCTCTTATCTCTAATCGGAATAGGGTTCGCGCAGTACCTTAAAGCAACTACAAATTTCAACCTCCCAAACCTTGAAACCTCAACCTCATGCGTCCATGATTTCCAGTCTCAGCTCAATTCCTTATCTCTCCAAAACAACCTCGTTGACTTGTGCTTTGACCCTCACCAGTTCGTCATGTCCCGAAACGTCTGCGCAGGAATTGAAACCCTAAAAGATTGGGACAAGAAGCTTGGTCAAATCACGCCTCTTGATACTAGTTGCAAACAAGACCTCACTGATCTTTCGCTATGTGATGTGTGTCTTACTGCGGGGTTTCAGGTGCAGCATAAACTTGTCTCCATTGATGGTAATGCTTCTCACTCTGAAAATTGTTTCAAATTTACTATTCTATATGCTGCTGCGTTTGTGAATCAGTATGGACCTGAAAGCAATGGTGCCATGAGTTGCATCTTTGGTATGTCACTTTACACACAGGGTGGTGGTTCTGGTGGGAAAAGTCACCAGGGTTTGGTTTTTGGGTTAACTGGTGCTGGTGTTGCTTTGTTAGTTATGTCTTGTTTGTTAGGGGTTTATGTTTGGTATGATAGGAAGGTTAGGAGGAAGAAGCTTAATGATGATGAATTTGACTTTGATCCTGAGGAACAAGGGTCTAGGCGTAGGTTGAGGCCGAATACAGGGTCTATTTGGTTCAAGATTGATGAGCTTGAGAAGGCTACCGATAATTTCTCAACCAAGAATTTCATTGGCAGGGGTGGATTTGGGCTTGTTTTCAAGGGGGTTTTGTCCGATGGTTCCGTCGTGGCAGTTAAGAGGATCTTGGAATCTGATTTTCAAGGGGATGTGGAGTTTTGTAATGAGGTGGAGATTATTAGCAACCTGAAGCACCGGAATCTGGTGCCTCTTCGAGGCTGTTGTGTAGTGGATGATGATGATGAAAAATTTAATGACAGGGGAAGCCAGAGGTTTTTGGTTTATGATTACATGCCGAATGGAAACCTTGAAGACCATCTGTTTCTGGTGAGTGAGCAGCAAAAGTTGAAGAAATCGCTGACTTGGCCTCAAAGGAAGAGCATAATCTTGGATGTGGCAAAGGGGCTGGCTTATCTTCACTATGGAGTCAAGCCTGCAATTTTTCATAGGGATATAAAAGCAACCAACATATTACTTGATGAAGACATGAGAGCCAGAGTTGCGGATTTCGGGCTTGCTAAACAAAGCAGGGAAGGCCAATCTCATCTCACTACAAGAGTAGCTGGAACTCATGGATATCTAGCTCCGGAATATGCTCTTTACGGTCAGCTTACAGAGAAAAGTGATGTGTATAGTTTTGGGGTTGTTGTTTTGGAGATAATGTGTGGGAGGAGAGCCCTTGACTTGTCTTCAGCAGGATCGCTAAAGGCATTCTTGATCACGGATTGGGCTTGGTCGTTGGTGAAATCAGGGAACATAGAAGAGGCATTGGATGCTTCTTTGTTGAAGGATGACAGCTTTGGAAGTTCAAATCCAAAGAGCATAATGGAAAGGTTTTTACTTGTGGGAATTCTATGCTCACATGTGATGGTTGCTCTGAGGCCAACAATTTCTGATGCATTGAAGATGCTGGAAGGTGATATTGAGGTTCCTCAAATCCCGGATCGGCCAATGCCGCTCGGACACCCTGCTACGTTTTACGGCGATGGCGGCAGTACTTTCAGCATATCTCCGGCCTTAAGCGGCCCCAAGTTGCAAACTGGAGACATGCTCAGGTCCATTGGTAAGAGCTGA 1965 0.4448 MKKVMVTMMMVMMMVSITMAAPSPSPSPSSPSTCPIDFSYVKRVPWNPSACENFHSLSSNLSNCCTSLLSLIGIGFAQYLKATTNFNLPNLETSTSCVHDFQSQLNSLSLQNNLVDLCFDPHQFVMSRNVCAGIETLKDWDKKLGQITPLDTSCKQDLTDLSLCDVCLTAGFQVQHKLVSIDGNASHSENCFKFTILYAAAFVNQYGPESNGAMSCIFGMSLYTQGGGSGGKSHQGLVFGLTGAGVALLVMSCLLGVYVWYDRKVRRKKLNDDEFDFDPEEQGSRRRLRPNTGSIWFKIDELEKATDNFSTKNFIGRGGFGLVFKGVLSDGSVVAVKRILESDFQGDVEFCNEVEIISNLKHRNLVPLRGCCVVDDDDEKFNDRGSQRFLVYDYMPNGNLEDHLFLVSEQQKLKKSLTWPQRKSIILDVAKGLAYLHYGVKPAIFHRDIKATNILLDEDMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRRALDLSSAGSLKAFLITDWAWSLVKSGNIEEALDASLLKDDSFGSSNPKSIMERFLLVGILCSHVMVALRPTISDALKMLEGDIEVPQIPDRPMPLGHPATFYGDGGSTFSISPALSGPKLQTGDMLRSIGKS* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0908 654 Pfam Protein kinase domain 310 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0908 654 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 648 - -
Ahy20g0908 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Ahy20g0908 654 SMART serkin_6 309 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0908 654 CDD STKc_IRAK 315 603 - -
Ahy20g0908 654 Gene3D Transferase(Phosphotransferase) domain 1 395 609 - -
Ahy20g0908 654 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Ahy20g0908 654 SUPERFAMILY Protein kinase-like (PK-like) 289 602 IPR011009 -
Ahy20g0908 654 ProSiteProfiles Protein kinase domain profile. 309 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0908 654 Pfam SPARK 29 192 IPR043891 -
Ahy20g0908 654 Gene3D Phosphorylase Kinase; domain 1 279 394 - -
Ahy20g0908 654 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 11 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0908 Ahy-Chr20 11712007 11714839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0908 30 649 Receptor kinase-like Gene Family AT1G11050 64.090 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Ahy20g0908 Pkinase 1.10E-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0908 - - gmx:100806560 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0908 20 11712007 11714839 Ahy20g0908 20 11712007 11714839 ECH
Ahy20g0908 20 11712007 11714839 Ahy10g0642 10 6442179 6444944 hybridization
Ahy20g0908 20 11712007 11714839 Ahy13g4027 13 139717922 139721045 PCT
Ahy20g0908 20 11712007 11714839 Ahy3g3751 3 136903921 136906393 PCT