Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0878 ATGAATCAGACAGATGTGCCCAAGGTTGGCATGTGTTTTGGAACCATTGAAGATGCAAATCAATTTTATCAGAATTATGCCAAGCGCATTGGTTTTGTTACTAAGATAAGGTTTACCCGAAGAGTTGGTAAAGATAAGGTTCCTAAGAATCAAATGATCACTTGCAATAGGGAGGGGAAACGCAAGTCTAGAGTTTCACCAATAGAAAAGACCAACCCTAGAACCAACTACAATTTCCCCGCAAGGATTTCTATTAGGTTGAATAAGGAGGGTCTTTGGATTATATCGAAGGTGTGTTTGGATCATTCACATCCTTGTGATCCAGAGATGGCAAAACTGTTGACACGTAATAGAGAGATGACTATGCACATGTGTCGAGTCATTGAGAGGAATGATGAAGTAGGTGTGAGACCAAACAAAACATATCAAGTATTGGTGGGTGAAGCGGGGGGTTTTTCTAAGATAAACTTAATGGAAAAAGATGTTAGGAACTATCTCAGCAGAAAGGTACGCAATGTTACGGAAGAAATGGATGCTAGGGAGATGTTGAAGTATTTTACACGGATGAAAGATATGAACTCTGATTTTTATTTTGATGTTGAACTTGATCAAAACAAGCGTCTCAAAACTATATTTTGGGCTGATGCTCGAAGTAGAGCAGCATATGAGTACTTCGGTGATGTAGTTTCGTTTGATACTACTTATAAAACCAATCGTTACGATATGCCATTTGGTTCCTTTGTGGGGGTTAATCACCATGGTAACTCGGTGCTTCTTGGGTGTGGTTTGTTGACTAAGGAAAATTCAGGCTCGTTTACTTGGTTATTTAATGCTTGGCTTACATGTATGCATGGAAAGGCTCCTAAAGGCATTATAACAGACCAATGCCTCGGAATACGAGCTGGAATTGAGAATGTGATGCCAGAGACACGTCATAGGTTATGCATTTGGCACATTACGAAAAAGATTCCAGAAAAATTCAAAAGACACAAGAGATATGAAGAGTTACAAAGTGATTTAAATAATATTGTTTGGGAGTCTATTTCAGAAGATGATTTTCAAAATCAATGGGAAGATTTTCTGATTGAATATGGTCTAGAAGATAACAAGTGGCTATCAGATATCTATGAAGAAAGACATCGATGGGTTCCAATTTTTCTTGACAACTTTTTTTGGGCTGGTATGAGATCCACACAACGAAGTGAGAGTATGCATTCATATTTTGACAAATTTATAAATAACAAGAGCTTGTTGATTCAATTTGTCAAACAATATGACAATTGCCTTGGATGGAAAGAGCAACAAGAAAGGGAGGCTGATGTTGAAGACTATAAATCAATAATACCTTGTGCCACTAATTCCTTAATAGAGAAGCAATTTCAAGGTGCATATACTAATGCAAAGTTTAAGGAAGTACAAAAGCAATTTAGAAAGAAAGCAAATTGTATTTTGCACCTTATGAAAGTAGTTTCTACATCTAAAGTCTATTCTATTTTGGAGGATGTATCTACTTCTAAAGAGAGGGTTTATGAAGTTAACTACAATGCGGAAACGAAGGATATTACATGCATGTGTCAAATGTTTGAATCAAGAGGCATATTATGCCGTCATAGCTTGGTTGTCCTAGGGCATGAACGCGTGAGAGAAATTCCAAGAAGTTATATTTTGGACCGTTGGAGCAAACTTGTGAAGCGAAGACACAGTGATATTAAGAGCAGCCATGATCCAAGTTTGTTGGATCCAAAAACAGAGATGTTTGATGATTTATGCTCCCATTCAATCAGTGTTGCTCAATTTGCATCCCAAACAAAGGAAACAAGTGATATCTTACATCGTTATCTTGATATGGCTATGGCGGAGTGCCAAAAGCATGTTGCTAACTCATCATCTAATGCCAATGAGTTAGATAATTTGCTTACATTAGAAGATGGTGGTAAAGATGGTGGTAAAGATGCACTGTCCATTTTTGTAGGAGGCTGTATAATAAGCATTCAAGATATTAAAAGCCCTCCTTATGTGTCCACTAAGGGTCGTCCAACAAATAGGCTAAGATCTGAAAAAGACAAGATGATAAAAAAGAAGACCGAGACAAAGAAGAGGAAAAGTGAGATAACCGAAAAAGAGGATAATCAACATATTGGAGATAGTCAAAGTCTCCCTTTCAACGAACAGGTTCATCCAATACTTCAAGATGCTAACTACAATGTTAATGAGGGATTTGAATCTGATTCAATGGGAGGATCAATGGGAGAATTCATGTCCTTATTGAACTCAATCCATTCATACCAATTCTCAAATGTCGATTGA 2307 0.3723 MNQTDVPKVGMCFGTIEDANQFYQNYAKRIGFVTKIRFTRRVGKDKVPKNQMITCNREGKRKSRVSPIEKTNPRTNYNFPARISIRLNKEGLWIISKVCLDHSHPCDPEMAKLLTRNREMTMHMCRVIERNDEVGVRPNKTYQVLVGEAGGFSKINLMEKDVRNYLSRKVRNVTEEMDAREMLKYFTRMKDMNSDFYFDVELDQNKRLKTIFWADARSRAAYEYFGDVVSFDTTYKTNRYDMPFGSFVGVNHHGNSVLLGCGLLTKENSGSFTWLFNAWLTCMHGKAPKGIITDQCLGIRAGIENVMPETRHRLCIWHITKKIPEKFKRHKRYEELQSDLNNIVWESISEDDFQNQWEDFLIEYGLEDNKWLSDIYEERHRWVPIFLDNFFWAGMRSTQRSESMHSYFDKFINNKSLLIQFVKQYDNCLGWKEQQEREADVEDYKSIIPCATNSLIEKQFQGAYTNAKFKEVQKQFRKKANCILHLMKVVSTSKVYSILEDVSTSKERVYEVNYNAETKDITCMCQMFESRGILCRHSLVVLGHERVREIPRSYILDRWSKLVKRRHSDIKSSHDPSLLDPKTEMFDDLCSHSISVAQFASQTKETSDILHRYLDMAMAECQKHVANSSSNANELDNLLTLEDGGKDGGKDALSIFVGGCIISIQDIKSPPYVSTKGRPTNRLRSEKDKMIKKKTETKKRKSEITEKEDNQHIGDSQSLPFNEQVHPILQDANYNVNEGFESDSMGGSMGEFMSLLNSIHSYQFSNVD* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0878 768 Pfam MULE transposase domain 228 322 IPR018289 -
Ahy20g0878 768 Pfam FAR1 DNA-binding domain 21 107 IPR004330 -
Ahy20g0878 768 PANTHER OS03G0843700 PROTEIN 4 630 - -
Ahy20g0878 768 MobiDBLite consensus disorder prediction 680 713 - -
Ahy20g0878 768 ProSitePatterns Transposases, Mutator family, signature. 294 318 IPR001207 GO:0003677|GO:0004803|GO:0006313
Ahy20g0878 768 ProSiteProfiles Zinc finger SWIM-type profile. 510 546 IPR007527 GO:0008270
Ahy20g0878 768 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 630 IPR031052 GO:0006355
Ahy20g0878 768 SMART 26again6 521 548 IPR006564 GO:0008270
Ahy20g0878 768 MobiDBLite consensus disorder prediction 672 719 - -
Ahy20g0878 768 Pfam SWIM zinc finger 510 543 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0878 Ahy-Chr20 11305642 11308571 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g0878 MULE 2.70E-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0878 - - ahf:112717726 1505.35