Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0857 ATGAATTTGGAGTGCATATCCAGAAAATGCATAAAGCCATCATCACCAACGCCTCCAAACCTTCAAATCTTCAACATGTCTCTTCTGGACCAGCTTTCCCCTAACATCCATGGCAACATCACCTTCTTCTACCCTCACAAAACTTCTGCTCAGGAATTCTCCGCCAAATCCCAACTCCTTCAGGACTCACTCTCTCAAATCTTGACGCTCTTCTATCCTCTCGCCGCCCGCCTCCGAGACGCCGCCACCATCCACTGCAACGACCAAGGAGCCTTCTTCATCCAATCACGAACCCAAACACCTCTCTCTCAGATCCTCTCCCCCCCTAACTTCGATATCATCCAGAATCTTCTCCCTACCACCCACTCCGACTCCTTGCTCCTTGTCCGCTTTACCTTGTTCGGTTGCGGCGCCACCGCCATCACCATCTCCCTTACTCACAAGATCGCTGACTTCGCAGCCTTGATCACTCTCCTCAAGGCATGGACCGCCGCCTGCATTGGCGGAGACACCCAGCCGGTGGTCCCCGAACTCGCCATCGGATCTGCTCTCTTCCCTCCGAGAGAGATTCTTCCCGCCGGGATATCAGGCTCCGTGAACATCGCGGCGGAGAAGTTCACGACGAGGAGGCTGATTTTCGAGTCTTCGAAGGTAGAAGAGCTGAAGAAGAGGGTGAAAAGCGAGCTTCAGTTTGAGGCGTCGAGGGTTGAGGTGGTGCTTGGTCTCATTTGGAGATGCGCATTGTTAACTACTTCAAAACGTAAAACGCCTTCAACCTTGTTCCAGGCAGTGAACCTGCGACGACGAATGGAACCTCCGATTCCAGAGACGGCGTTGGGGAACTTGGTGTGGGCGTTTGCAGTGACTGTGGAGGAGGAGTGTGAGGTAGAGTTGCAGGTGGTAGTAAAGAAGATGAGGGATTCTTTGAAGGAATTCATGGAGAGGAAAGGCGAAAGGTTGAATAATTCAGAAGGTAGGTGTGAGGTGGTGATGGAGGATTTGAAGGAGAGGGGTGAGATGTTGAAGAAGAGTGGTAATGTGGTGTATAAGTGTTCGAGTTGGTGCAAAGTTGGATCATCACTGTATGAGGTTGATTTTGGGTGGGGGAAGCCGCTTTGGATGTGCAGCGTGAACAACATAGTGAGTAACACCGTTGCTTTGATGGATACAAGGGATGGGCATGGCGTCGAAGCTTTTGTCACCTTGGATCATCAACACATGGATTCCTTTCAACAATCTCAGGAACTCCTTCACTATGCTTTGCTTAATCCCCCTCTTCTGTAA 1284 0.5093 MNLECISRKCIKPSSPTPPNLQIFNMSLLDQLSPNIHGNITFFYPHKTSAQEFSAKSQLLQDSLSQILTLFYPLAARLRDAATIHCNDQGAFFIQSRTQTPLSQILSPPNFDIIQNLLPTTHSDSLLLVRFTLFGCGATAITISLTHKIADFAALITLLKAWTAACIGGDTQPVVPELAIGSALFPPREILPAGISGSVNIAAEKFTTRRLIFESSKVEELKKRVKSELQFEASRVEVVLGLIWRCALLTTSKRKTPSTLFQAVNLRRRMEPPIPETALGNLVWAFAVTVEEECEVELQVVVKKMRDSLKEFMERKGERLNNSEGRCEVVMEDLKERGEMLKKSGNVVYKCSSWCKVGSSLYEVDFGWGKPLWMCSVNNIVSNTVALMDTRDGHGVEAFVTLDHQHMDSFQQSQELLHYALLNPPLL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0857 427 Gene3D - 1 193 IPR023213 -
Ahy20g0857 427 Gene3D - 203 419 IPR023213 -
Ahy20g0857 427 PANTHER VINORINE SYNTHASE-RELATED 2 425 - -
Ahy20g0857 427 PANTHER F21J9.9 2 425 - -
Ahy20g0857 427 Pfam Transferase family 2 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0857 Ahy-Chr20 11043310 11044942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0857 1 412 Monolignol Biosynthesis Gene Families AT5G48930 25.000 3.41e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0857 - - aip:107620102 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0857 20 11043310 11044942 Ahy10g0589 10 5874550 5876310 hybridization