Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0852 ATGAAGGGTATGGCGAACGTATTGAGCGGGTTGAAACCCGTGATTCTAATGGTGTTGGTGCAGGTTGCATTCACTGCTGTCAATGTCTTCTACAAGCTTGCCATCAATGATGGGATGAGTGTTAAAGTTCTCACTGCTTATCGTCTCGCTTTTGGTGCTGCTTTCACTGTTCCACTTGCTCTTGTTTCTGAAAGGAACAAGAGACCAAAGATGACTTGGAGGGTGCTTTTCATGTCATTTCTTTGCGGCTTCTTTGGGGCAAGTTTGTTTCAGAACCTTTTCTATGAGGCACTGGCTTTGACGTCAGCAACGTTTGTGTCTGCCATCTACAACCTCATACCAGGCATCACTTTTGTGTTGGCCATAACCTTCGGTTTTGAGAAACTGAAACTGAGGGGAGCAGCTGGAAAGGCCAAGGTGTTTGGAACCCTGATTGGAATTGGTGGGGCAATGGTGTTGACTTTTGTCAAAGGGGTTCAAATTAATATATGGCCTTTCCATGTCAACCTTTTGAAGAACCCATCACATCATCATAATACGCATACAAGTAGTAACGACTTGTTGGGGGTTGTGTGCGCCATTGCTAGCTGCTTCTCTTATGCTTCTTGGCTCATCATTCAGGCTAAGATGACCAAGGAATACCCAAGTCATAACTCAAGCACAGCTTTGATGCTTACAGCAGCAGCTATTCAAGCCACTGTTTTTGCTTTTTGCACTGAGAGGGATCTCCATCAATGGAAGCTTGGTTGGAATATCAGGCTTTTGGCTTCTGCTTATTCGGGAATTGTGGGGTCTGGAGTAGTGTTTCTCATCATAGCATGGTGCATACAAATGAGAGGGCCATTATTTGCCTCCATTTTCAACCCTCTCATGCTTGTGCTTGTGGCTGTTGCGGCTTCTTTCATGTTGGATGAGCAATTGTATCTTGGAAGTGTGATTGGAGCAGTGGTGATAGTGTGTGGACTATACATGGTTCTATGGGGAAAGAACAAAGAGATGAAAAAGGTAACTCAGTTGCTGCCATCTGAAATCATGCAATTACAGCAGCAGCAGGATCAACAACAGACTATACAAGTTGTTGTTACGTCCACGCCAGTTGTCAAATGTGAGCAACAACAATAA 1122 0.4439 MKGMANVLSGLKPVILMVLVQVAFTAVNVFYKLAINDGMSVKVLTAYRLAFGAAFTVPLALVSERNKRPKMTWRVLFMSFLCGFFGASLFQNLFYEALALTSATFVSAIYNLIPGITFVLAITFGFEKLKLRGAAGKAKVFGTLIGIGGAMVLTFVKGVQINIWPFHVNLLKNPSHHHNTHTSSNDLLGVVCAIASCFSYASWLIIQAKMTKEYPSHNSSTALMLTAAAIQATVFAFCTERDLHQWKLGWNIRLLASAYSGIVGSGVVFLIIAWCIQMRGPLFASIFNPLMLVLVAVAASFMLDEQLYLGSVIGAVVIVCGLYMVLWGKNKEMKKVTQLLPSEIMQLQQQQDQQQTIQVVVTSTPVVKCEQQQ* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0852 373 PANTHER WAT1-RELATED PROTEIN 12 352 - -
Ahy20g0852 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 331 - -
Ahy20g0852 373 PANTHER WAT1-RELATED PROTEIN 12 352 IPR030184 GO:0016021|GO:0022857
Ahy20g0852 373 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Ahy20g0852 373 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
Ahy20g0852 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0852 Ahy-Chr20 10990340 10992192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0852 11 337 Nodulin-like Gene Family AT1G25270 43.731 1.33e-95 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0852 - - gmx:100798755 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0852 20 10990340 10992192 Ahy10g0583 10 5822967 5824882 hybridization
Ahy13g4183 13 141314614 141316757 Ahy20g0852 20 10990340 10992192 PCT
Ahy20g0852 20 10990340 10992192 Ahy3g3906 3 138419153 138421233 PCT