Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0851 ATGAAGAACATGTGGAAGGTGGTGGAAGTGGTGAAGCCGGTGGTGTTGATGGTGATTGTGCAGATAGCAAATGCATGGGTCAATGTTCTCTACAAGCTTGCTGTCAACGATGGCATGAGCCTCAGAGTAGTTGTTGCCTACCGCTATATCTTCGCTACTGCTTTCATTGCTCCTCTTGCTTATATTCTCGAGAGGAAGACAAGGACAAAGATGACTTGGACCATTCTCTTTCAGTCATTCTTGTGCGGTTTATTTGGGGGAGCATTGCCTCAGAACTTACAAATGGAAGCGCTTGCTTTAACTTCTGTAACATTTGCAACCGCCATATCCAACCTGATTCCGGCCATCACCTTCATCTTGTCCCTCTCCTTCGGAATGGAGAGGTTGAATCTAAGAAAAGCAGCAGGGAAGGCGAAGATAATAGGAACAATGATTGGAATTGGCGGGGCAATGTTGATGACATTCTATAGAGGCGTGGAAGTTAAGATGCTATCCTTCCACATTAACCTCTTCAATCAGCGAAATGGCGGCGGCGCCGTACACTCGTCACATGGTGGCGGAGGGTTGTTCTTGCTGGGTGCTGTGTCGTCGTTCTCCAGCAATGCGTCTTATGCGTTGTGGCTGATCATTCAGGCGAAGATGAGTAGAGCATATCCGTATCCATATTCAAGCACTGCACTCATGTGTGTAATGGGAGCAATTCTTTCTGTCACCTTCACATTTTGTGTTGAGAGGGATTTGAGTCAGTGGAAGTTGGGTTGGAATGTCAGGCTACTCACTGTAGCTTACGCGGGTATAGTGGTTTCAGGAGTGATGGTGGCTGTGATATCGTGGTGCGTACGCATGAGAGGTCCCTTGTTTGTCTCTGTTTTTAGTCCTCTCATGCTAGTGGTTGTTGCCTTTGCTGGATCCACCATTCTTGATGAGAAGCTATATCTTGGAAGCATAATTGGATCGTTGTTAATTGTGTGCGGCTTATACCTGGTTCTATGGGGTAAAAGCAAAGAGAAGGTGAAGAATCAATTAGTGCCATCAAAAAGCGACAAACTTGAAATAGTGGTCAAGCCTCAAGTACATGGCATCCATGGGGATGATGAAGATCAAGATTCATTCAAAAAAGGAGGTGACATGCACCACAATAGAGAAAAAGGAGGAGAACAACATTAA 1167 0.4559 MKNMWKVVEVVKPVVLMVIVQIANAWVNVLYKLAVNDGMSLRVVVAYRYIFATAFIAPLAYILERKTRTKMTWTILFQSFLCGLFGGALPQNLQMEALALTSVTFATAISNLIPAITFILSLSFGMERLNLRKAAGKAKIIGTMIGIGGAMLMTFYRGVEVKMLSFHINLFNQRNGGGAVHSSHGGGGLFLLGAVSSFSSNASYALWLIIQAKMSRAYPYPYSSTALMCVMGAILSVTFTFCVERDLSQWKLGWNVRLLTVAYAGIVVSGVMVAVISWCVRMRGPLFVSVFSPLMLVVVAFAGSTILDEKLYLGSIIGSLLIVCGLYLVLWGKSKEKVKNQLVPSKSDKLEIVVKPQVHGIHGDDEDQDSFKKGGDMHHNREKGGEQH* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0851 388 PANTHER WAT1-RELATED PROTEIN 12 351 IPR030184 GO:0016021|GO:0022857
Ahy20g0851 388 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020|GO:0016021
Ahy20g0851 388 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020|GO:0016021
Ahy20g0851 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Ahy20g0851 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 335 - -
Ahy20g0851 388 PANTHER WAT1-RELATED PROTEIN 12 351 - -
Ahy20g0851 388 MobiDBLite consensus disorder prediction 357 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0851 Ahy-Chr20 10965498 10970258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0851 3 349 Nodulin-like Gene Family AT1G68170 44.957 9.02e-100 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0851 - - adu:107486536 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0851 20 10965498 10970258 Ahy10g0582 10 5807540 5814390 hybridization
Ahy20g0851 20 10965498 10970258 Ahy13g4182 13 141308336 141311035 PCT
Ahy20g0851 20 10965498 10970258 Ahy3g3905 3 138413145 138415365 PCT