Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0850 ATGACCACCAAGCCCAAGGGCAATGCCTTGCAGGGCTTGAAGCCCGTGATTCTTATGGTCATGGTTCAGATTGCATTCGCCGGTGTCAACATCCTCTACAAGCTCGCCGTTAACGATGGCATGAGTCTCAGAGTCACTGTCGCCTACCGCTTCATTTTCGCTACTGCTTTCATTGCTCCCTGTGCTCTCTTTTTCGAAAGGAAGAAGAGGGCGAAACTGACATGGATGGTACTATTTCAATCATTTCTATGCGGCTTATTTGGAGGAGCATTAGCTCAGAATTTCTACCTGGAGGCTCTGGCTTTAACTTCTGCAACGTTTGCATCCGCCATGGCCAACCTCATACCTGCTATTACCTTTGTGATGGCCGTTTGCATAGGTTTGGAAAGATTGAATTTGGGATCAGCAGCAGGGAAGGCGAAGATAATCGGAACAATGGCCGGAATTGCAGGAGCAATGGTGCTGACTTTCGTGAAAGGCCCGGAAATCCAGATTGCATCGCATGTTAACCTTATGAATCACAGAAACAATAGTTCTATGGCGGCTCATGGCGGCGGTGGTAGGACGGTGTTGGGATCTGTGTGCGCGTTGGCGAGCGGGATCTCTTACGCACTGTGGCTCATCATACAGACAAAGATGAGTGAGAGGTATCCAAGCTATTACTCCAGCACTGCGCTCATGTCTCTCTGGGCGGCGCTCTTGTCCACGGCGTTCGCTCTTTCCGTCGAGAACGATTGGAGTCAGTGGAGGCTTGGTTGGAACATTAGGCTTCTGACGGTTGCTTATTCCGGCATGGTTGTTTCTGGAATGATGGTGGCTGTGATCTCCTGGTGCGTCCGCAAGAGAGGGCCCTTGTTCGCCTCTGTTTTCAGCCCTCTCTTGCTCGTCATTGTCGCCGTGGCTAGCTCCACCGTCTTGAACGAGAAGCTGTACCTTGGAAGCTTCATCGGAGCGGTGTTGATTGTGTGTGGGTTATACGCTGTTCTTTGGGGGAAAAGCAGAGAGAGGAAGAAGATGAAGAATATGAGTCAATTACCACAATGCCCTCATGACGATGATGATGACACTCTACAAGTAATTGTGACCAGGTCTAATTCTAAAGTAGGAGAAGATCGTAAAAGCAACAACAATGGACACGTGGACGATAACCAAGGTTCAATAGATCATGGTAATAATAATAAGGGAATAACAAGAGATCAAGAACAAGAAGAAGAAAAACAAAATGATGAAGAGGGAATTTCTCCCAATGCAGAAGACATTATCCCTAGTGTAGTAATATAA 1281 0.4778 MTTKPKGNALQGLKPVILMVMVQIAFAGVNILYKLAVNDGMSLRVTVAYRFIFATAFIAPCALFFERKKRAKLTWMVLFQSFLCGLFGGALAQNFYLEALALTSATFASAMANLIPAITFVMAVCIGLERLNLGSAAGKAKIIGTMAGIAGAMVLTFVKGPEIQIASHVNLMNHRNNSSMAAHGGGGRTVLGSVCALASGISYALWLIIQTKMSERYPSYYSSTALMSLWAALLSTAFALSVENDWSQWRLGWNIRLLTVAYSGMVVSGMMVAVISWCVRKRGPLFASVFSPLLLVIVAVASSTVLNEKLYLGSFIGAVLIVCGLYAVLWGKSRERKKMKNMSQLPQCPHDDDDDTLQVIVTRSNSKVGEDRKSNNNGHVDDNQGSIDHGNNNKGITRDQEQEEEKQNDEEGISPNAEDIIPSVVI* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0850 426 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Ahy20g0850 426 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 335 - -
Ahy20g0850 426 PANTHER WAT1-RELATED PROTEIN 14 366 - -
Ahy20g0850 426 MobiDBLite consensus disorder prediction 379 393 - -
Ahy20g0850 426 MobiDBLite consensus disorder prediction 364 426 - -
Ahy20g0850 426 MobiDBLite consensus disorder prediction 394 413 - -
Ahy20g0850 426 Pfam EamA-like transporter family 14 156 IPR000620 GO:0016020|GO:0016021
Ahy20g0850 426 Pfam EamA-like transporter family 192 329 IPR000620 GO:0016020|GO:0016021
Ahy20g0850 426 PANTHER WAT1-RELATED PROTEIN 14 366 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0850 Ahy-Chr20 10943953 10946397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0850 13 344 Nodulin-like Gene Family AT1G25270 44.478 8.67e-95 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0850 - - aip:107620100 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0850 20 10943953 10946397 Ahy10g0581 10 5791392 5793936 hybridization