Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0843 ATGGCTGCATTTGTACCCTCTGATATGGTTTCAACCAACCATAACAATGGTGGAGTTTTAGTTGTTGCAATCAACAACAAAGACGAGAAGGGACAACAAATGATGAGTGAAGAAAAAGAAGAAGAAGAAGAAGAAAAGAAGATTGACTACTCGCAAAGAGCACAGTGGCTTCGTGCGGGTGTAATGGGAGCCACGGACGGATTAGTATCAGTGGCTTCGTTAATGATGGGAGTGGGAGCGGTTCGAACCGACGCAAAAGCAATGCTTCTTGCTGGTTTTGCAGGATCAGTTGCAGGAGGTTGTAGCATGGCAATAGGTGAGTTTGTTTCTGTGTACACACAGTATGAAGTCGAAGTTGCTCAAATCAAGAACAAAACAATTTCTCAAGACGTGCAAATGGTTAAGAAAGCGTTACCTAATCCATTGCAAGCTGCATTGGCATCTGCATCGTGTTATTGTTTAGGTGCGGTGCCTCCTTTGGTGGGAGCAGCGTTTATTAGAGACTACCGTACAAGGATTATGGTGGTTTTGGCGGTGGCTACTCTCTCTTTGTTTGTGTTTGGTTGGATTGGCTCTGTCCTTGGAAACACACCAATGCTTAGGTCTTGTGCTAGGCTTCTTCTTGGTGGATGGATGGCTATGGCTATTACTTTTGCCTTAACCAAATTGTTTGCTTTTACCGGTTTGCAATTCGAGGTGTCAGCAGGAAGTTGCAAAGTGATAGGAAGAGGTATGGGGGTGGTTGTATGGGAGTTGTTGTGGTTGCTAATGGTGTTGACAAGTTGTTGTGAGGGTCAGTTTATTCTTCAAGTGGGTTTCTACAGAAACACGTGTCCTGAAGCTGAGTCCATTGTCCATGGCGTAGTGAGAGACGCCGTTGCCTCTGACCCCAACATGGGGGCGGCCTTGCTCAGGCTTCACTTCCATGACTGCTTTGTTGAGGGATGCGACGCTTCCATTCTCATCGACGTGTCATCACAGCCGGAGAAGCTTGCATTTGCTCATCAAGGCCTCAGAGGCTTTGAGGTCATTCAGAGAGCCAAGGCTCAATTGGAAGCTTCTTGCCCTGCCCTTGTTTCTTGTGCTGACATTCTCGCTTTGGCTGCCAGAGACGCCATTGCTCTGACCAATGGACCAATATATCAAGTTCCAACTGGACGCAGAGATGGTTTCGTTTCCAATTTTAGCCTTGCAGATGAAATGCCTCAAGTTACTGATTCTATTCAGATACTCAAGGCCAAGTTCCTCAACAAGGGTCTCACCCACAAAGACCTTGTTCTTCTCTCTGCTGCACATACAATTGGAACAACAGCATGCTTCTTCATGACAAAAAGGCTATACAACTTCTTCCCGGGTGGTGTGGGAACAGACCCAGCTATCAACCCAAACTTCCTCCCAAGGCTGAAGGCTAGGTGCCCTCAAAACGGCGATGTTAACGCTCGCCTCGCCATCGATGAAGGCGGTGGGACGGAATTTGACAAACACATTCTCAAGAACATAAGGGAAGGTTTTGCTGTCTTAGAATCTGATGCTAGGCTTAATGATGATATATTCACCAAGAGTGTTATGGATTCCTACTTTAGTCCCCTTAATCCAATTTTTGGACCTTCTTTTGAAGCTGATTTTGTTGAGTCTATTGTGAAAATGGGCCAAGTTGGTGTCAAGACTGGTTTTCTTGGAGAGGTTAGGCGAGTTTGCTCAAGATTCAATTCATGA 1716 0.4592 MAAFVPSDMVSTNHNNGGVLVVAINNKDEKGQQMMSEEKEEEEEEKKIDYSQRAQWLRAGVMGATDGLVSVASLMMGVGAVRTDAKAMLLAGFAGSVAGGCSMAIGEFVSVYTQYEVEVAQIKNKTISQDVQMVKKALPNPLQAALASASCYCLGAVPPLVGAAFIRDYRTRIMVVLAVATLSLFVFGWIGSVLGNTPMLRSCARLLLGGWMAMAITFALTKLFAFTGLQFEVSAGSCKVIGRGMGVVVWELLWLLMVLTSCCEGQFILQVGFYRNTCPEAESIVHGVVRDAVASDPNMGAALLRLHFHDCFVEGCDASILIDVSSQPEKLAFAHQGLRGFEVIQRAKAQLEASCPALVSCADILALAARDAIALTNGPIYQVPTGRRDGFVSNFSLADEMPQVTDSIQILKAKFLNKGLTHKDLVLLSAAHTIGTTACFFMTKRLYNFFPGGVGTDPAINPNFLPRLKARCPQNGDVNARLAIDEGGGTEFDKHILKNIREGFAVLESDARLNDDIFTKSVMDSYFSPLNPIFGPSFEADFVESIVKMGQVGVKTGFLGEVRRVCSRFNS* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0843 571 ProSitePatterns Peroxidases proximal heme-ligand signature. 424 434 IPR019793 -
Ahy20g0843 571 Pfam Peroxidase 287 526 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 PANTHER PEROXIDASE 251 568 - -
Ahy20g0843 571 PANTHER PEROXIDASE 25-RELATED 251 568 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 CDD Nodulin-21 55 198 - -
Ahy20g0843 571 PRINTS Plant peroxidase signature 302 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 PRINTS Plant peroxidase signature 339 352 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 PRINTS Plant peroxidase signature 544 557 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 PRINTS Plant peroxidase signature 423 435 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 PRINTS Plant peroxidase signature 278 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 PRINTS Plant peroxidase signature 377 392 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 PRINTS Plant peroxidase signature 358 368 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 PRINTS Plant peroxidase signature 499 516 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 Gene3D - 272 570 - -
Ahy20g0843 571 ProSiteProfiles Plant heme peroxidase family profile. 268 570 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 Coils Coil 27 47 - -
Ahy20g0843 571 Pfam VIT family 134 221 IPR008217 GO:0005384|GO:0030026
Ahy20g0843 571 Pfam VIT family 57 126 IPR008217 GO:0005384|GO:0030026
Ahy20g0843 571 ProSitePatterns Peroxidases active site signature. 300 311 IPR019794 GO:0004601
Ahy20g0843 571 SUPERFAMILY Heme-dependent peroxidases 269 570 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 Gene3D Peroxidase, domain 2 402 549 - -
Ahy20g0843 571 CDD secretory_peroxidase 269 569 IPR033905 GO:0004601|GO:0042744
Ahy20g0843 571 PRINTS Haem peroxidase superfamily signature 359 376 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 PRINTS Haem peroxidase superfamily signature 377 389 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 PRINTS Haem peroxidase superfamily signature 424 439 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy20g0843 571 PRINTS Haem peroxidase superfamily signature 300 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0843 Ahy-Chr20 10887548 10890227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0843 269 570 Peroxidase AT1G77100 52.961 6.31e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0843 K00430 - gmx:547549 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0843 20 10887548 10890227 Ahy20g0843 20 10887548 10890227 ECH
Ahy20g0843 20 10887548 10890227 Ahy10g0571 10 5701246 5710213 hybridization