Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0826 ATGAGTCAGCGTGTGAGTGATGATGCTATGGCGGAAGTTATAGCAGAAACAAGAAGCGATTCTTCTTCACGTAGACATGGAGGAGGAGATGATGCTGTTGTTACTGATCTGCCATATATGCACAGAGTTGGAACTCCTCCTAAGCAGCCACTCTTCCAAGAGATCAAGCATTCTCTCATGGAGACTTTCTTCGCTGACAAGCCCTTTCACAAGTTCAAGGACCAATCTGGATCTAGAAAGTTCGTTCTCGCTCTCCAATCTCTCTTCCCCATTCTTGAATGGGGAAGAGATTACAACCTCAAGAAATTCAGAGGCGATTTCGTTTCCGGACTCACCATTGCAAGTCTTTGCATTCCTCAGGACCTTGCATATGCGAAGCTTGCATATTTGGATCCTTGGTATGGATTATACTCAAGTTTTGTGGCACCTCTGGTGTATGCTTTCATGGGAACCTCAAGAGATATTGCGATAGGACCTGTAGCTGTGGTGTCCCTCTTGCTTGGGAGTTTGCTTTCTAGTGAGATCAGTGACACCAAAAGCCATGATTACGTGCGCCTTGCATTCACTGCTACCTTCTTTGCAGGAGTCACTCAATTGGCACTTGGAGTTTGCAGGCTTGGTTTCTTGATAGATTTTCTATCTCATGCTGCCATTGTGGGCTTCATGGCTGGAGCTGCCATTACTATTGCAATGCAACAGCTTAAAGGTCTGCTTGGCATAAAGAACTTCACTACAAAAACTGATATTGTTTCTGTATTGCATTCGGTTTGGAGTAATGTGCACCATGGGTGGAATTGGGAGACTATACTCATTGGACTATCATTCTTAATCTTCCTTCTTATAACGAAGTATATTGCTAAAAGAAACAAGAAACTCTTTTGGGTATCTGCAATTTCTCCTATGATCTCTGTTGTAGTGTCTACATTTTTTGTGTACATTACCAGAGCAGACAAAAGAGGCGTATCAATTGTGAAGCATATCAAGAGTGGTGTGAATCCATCATCAGCTAACGAAATCTTTTTCAGTGGAAAATATCTAGGCGCTGGTGTTAGAGTTGGTATTGTATCTGGCATGGTTGCACTTACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCAATGAAAGATTATTCACTTGATGGCAACAAAGAAATGGTGGCAATGGGAACAATGAACATTGTTGGTTCTTTGACATCATGCTATGTGACAACAGGATCTTTTTCTCGGTCAGCAGTGAACTTCATGGCTGGTTGTCAAACTGCTGTATCAAACATTGTGATGTCCATTGTTGTGTTACTAACTCTGTTGGTCCTCACACCACTTTTTAAGTACACTCCAAATGCAGTTCTTGCTTCTATTATAATAGCTGCTGTTGTAAACCTGGTGAACATTGAGGCAATGGTTCTGCTCTGGAAGATTGACAAATTCGATTTTGTTGCTTGCATGGGAGCATTCTTTGGTGTCATCTTCAAGAGTGTTGAGATTGGCCTTCTAATCGCGGTGGCAATTTCATTTGCCAAGATACTTTTACAAGTGACAAGGCCAAGAACTGCAGTTCTTGGTAAGCTTCCGGGGACTACTGTTTATAGGAACATCCAGCAATACCCCAAAGCAGCACAGATTCCTGGCATGCTCATTATCAGGATTGACTCTGCTATCTACTTCTCAAATTCCAACTATATCAAGGAGAGAATATTGAGATGGTTGATTGAAGAAGAATCTCAAAGGACAGAAAGTGAATTACCGGGAATACAGAATCTCATTGTTGAAATGTCACCTGTTACTGATATTGACACAAGTGGCATCCATGCCTTTGAAGAATTATACAAGACCCTTCAGAAAAGAGAAGTTCAGCTTATATTGGCGAATCCGGGGCCAGTTGTAATAGAGAAGCTCCATGCATCCAAGCTTACAGATCTAATTGGAGAAGATAAAATATTTCTCACAGTGGCTGATGCTGTTGCAACTTTTGGTCCAAAGGGTGTTAAATAA 1992 0.4182 MSQRVSDDAMAEVIAETRSDSSSRRHGGGDDAVVTDLPYMHRVGTPPKQPLFQEIKHSLMETFFADKPFHKFKDQSGSRKFVLALQSLFPILEWGRDYNLKKFRGDFVSGLTIASLCIPQDLAYAKLAYLDPWYGLYSSFVAPLVYAFMGTSRDIAIGPVAVVSLLLGSLLSSEISDTKSHDYVRLAFTATFFAGVTQLALGVCRLGFLIDFLSHAAIVGFMAGAAITIAMQQLKGLLGIKNFTTKTDIVSVLHSVWSNVHHGWNWETILIGLSFLIFLLITKYIAKRNKKLFWVSAISPMISVVVSTFFVYITRADKRGVSIVKHIKSGVNPSSANEIFFSGKYLGAGVRVGIVSGMVALTEAVAIGRTFAAMKDYSLDGNKEMVAMGTMNIVGSLTSCYVTTGSFSRSAVNFMAGCQTAVSNIVMSIVVLLTLLVLTPLFKYTPNAVLASIIIAAVVNLVNIEAMVLLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTVYRNIQQYPKAAQIPGMLIIRIDSAIYFSNSNYIKERILRWLIEEESQRTESELPGIQNLIVEMSPVTDIDTSGIHAFEELYKTLQKREVQLILANPGPVVIEKLHASKLTDLIGEDKIFLTVADAVATFGPKGVK* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0826 663 MobiDBLite consensus disorder prediction 11 29 - -
Ahy20g0826 663 Pfam Sulfate permease family 103 482 IPR011547 GO:0016021
Ahy20g0826 663 Gene3D STAS domain 514 658 IPR036513 -
Ahy20g0826 663 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 19 662 - -
Ahy20g0826 663 Pfam STAS domain 535 653 IPR002645 -
Ahy20g0826 663 ProSiteProfiles STAS domain profile. 534 657 IPR002645 -
Ahy20g0826 663 PANTHER SULFATE TRANSPORTER 19 662 IPR001902 GO:0015301|GO:0016020|GO:0055085
Ahy20g0826 663 CDD STAS_SulP_like_sulfate_transporter 535 650 - -
Ahy20g0826 663 SUPERFAMILY SpoIIaa-like 536 658 IPR036513 -
Ahy20g0826 663 TIGRFAM sulP: sulfate permease 90 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Ahy20g0826 663 ProSitePatterns SLC26A transporters signature. 132 153 IPR018045 GO:0008271|GO:0008272
Ahy20g0826 663 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0826 Ahy-Chr20 10622755 10627010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0826 22 660 Inorganic Solute Cotransporters AT1G22150 71.538 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0826 K17470 - gmx:100784124 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0826 20 10622755 10627010 Ahy20g0826 20 10622755 10627010 ECH
Ahy20g0826 20 10622755 10627010 Ahy10g0554 10 5486843 5490980 hybridization