Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0807 ATGATTGTGCTTGAATTAACTTCAAAAGATCTTACAGTGCGATGTGCATTGTTTGGGGACTATGTTAATCAAGTAAATCATTTCCTTGCTTCTGGCTATGTGGAGCAGCCTGTTGTGGTGATTCAACTTGCTAAAGTCAAGTTCTTTAGGGGTCAAGTAGGCCTTCAAAATGTGATATATGCCACTCAAATATTATTTAATCTTGATTTTCCTGAAGTTGTTGAATTCAGGCAGAGTATGATTGAGCAAGGTGTCAATGGTACCCAACCACTGTTTATTGCAAATGAAGGTAAAATTGTCTCCTTGGAAGATGATTTCATGCATTTAACTAGAAAATGTACTATTGAAGAGCTTCAAGATAACAATGAGGAGGGTTCTTTTATCATTTTTGGTACAATCCAAGGTATTGTTGAGGATGGAGGTTGGTGGTATTCTGCTTGTGTGTGTGGAAAGGGTATCTATCCTCAAAATGGTGCATATTACTGTGATTTTTGTTTGAAGTACATAATTAATGTGACTCCAAGATTTAAAATTAAAATAACAGTTGAAGATCATAGTGGGGAGGGTATTTTCCTTTTCTTTGATCGTGAGGCATCTTATTTGCTTAAGAAATCATGTGCTGACTTATTTACCGAGGTTCAAAGAGATGCAAGTCTTGTATGTGGAGATACTTATCCTCCCCTATTCCAAGGGCTCATTGGAAAGAAGTTACTGCTGAATATGTGA 726 0.3664 MIVLELTSKDLTVRCALFGDYVNQVNHFLASGYVEQPVVVIQLAKVKFFRGQVGLQNVIYATQILFNLDFPEVVEFRQSMIEQGVNGTQPLFIANEGKIVSLEDDFMHLTRKCTIEELQDNNEEGSFIIFGTIQGIVEDGGWWYSACVCGKGIYPQNGAYYCDFCLKYIINVTPRFKIKITVEDHSGEGIFLFFDREASYLLKKSCADLFTEVQRDASLVCGDTYPPLFQGLIGKKLLLNM* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0807 241 Gene3D - 102 241 IPR012340 -
Ahy20g0807 241 Pfam Replication factor-A C terminal domain 129 213 IPR013955 -
Ahy20g0807 241 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 9 210 - -
Ahy20g0807 241 SUPERFAMILY Nucleic acid-binding proteins 11 80 IPR012340 -
Ahy20g0807 241 CDD RPA1_DBD_C 115 241 IPR013955 -
Ahy20g0807 241 Gene3D - 1 89 IPR012340 -
Ahy20g0807 241 PANTHER REPLICATION FACTOR A 1, RFA1 9 210 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy20g0807 241 SUPERFAMILY Nucleic acid-binding proteins 112 238 IPR012340 -
Ahy20g0807 241 CDD RPA1_DBD_B_like 10 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0807 Ahy-Chr20 10325629 10328156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0807 12 209 Core DNA Replication Machinery Family AT5G08020 24.645 6.22e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0807 - - ahf:112785403 493.812