Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0806 ATGGCGGAGCGTCCTTCCTTCGGATTGGGTCCTCGATTGGACTTTCAGCAACTACAATTTGAAGCCCAGCATCGCTGGTTGAGACCTGCAGAAATTTGTGAAATTCTTCGTAACTATCGGATGTTTCAAATCACGTCAGAACCTCATAACAGGCCACCAAGTGGTTCACTATTTCTATTTGATCGAAAGGTTTTGAGATACTTCAGAAAGGATGGGCATAATTGGAGAAAGAAAAAAGATGGAAAAACCGTGAAAGAAGCTCATGAAAAATTGAAGGTGGGAAGTGTTGACGTGTTGCATTGCTACTATGCCCATGGTGAAGAAAATGAAAATTTTCAGAGACGAAGCTATTGGATGCTTGAACCGGATATGACGCACATAGTATTTGTACATTATTTGGAAGTTAAGGGTAACAAGACAAATACTGGAGGAAATATAGATAGTTATGATGTTTCGTCTGACTCCCAAAGGACCCCTTCTCCATCATCTGGCTTACCAACAAATTATAGCAACTTGCCTTCACTGAGTACAGATTCCATGAGTCCAGCTAGCAGTTTGGCATCTTTACGTGAAGATGCTGATTCTGAGGAGATTCACCAAGCAAGCTCCAGATTACACACACTAAATGAGTCACAACATATGCGGAATGGTCACCCGACAGACAAAGTTGATACTGGTGATCGAGGACAGTCTTCAATTTCTGGAGATTATATCCCAGTTGTTCCGGCGGAAAGATTTGGAGGAAGTGATACTACTTATATTGATGGTCAGAAAGCACATAGCATGGCATCCTGGGACACTGTGTTGAAGCAATGCAATGCAGAATTGCAGAGTGATCCTTCGTTTGTACCATTTTCTTCCATACCATCGAGTTTGATAGGAAACACTGTAGAACAAGAACGTAATGACTTTGGTGACCTCTTAGGGAGCAAAAGTAGCCTCACTGAGGAGGCAGGGAGCTCGCAATCTATCCAATCAAATTGGCAGATTCCTTTTGAAGAAAGTTCAGGACGCTTGCCAAACTTAACCCAATCATTGAGTTTGGAATTTGGATCTGATTATATATCTGGTTTAGTTGGGAATGAAACTCTTAATGCAAGTTCTGAAATTGATCCTCACCTGTTTAACTTTCATGGTGAGCCGAAAGAGCAGCATGTGCAACAACACTATCCAGAACGGCATGCAGATGGACAATCTCAGTATGCACTTCAATCCAATTCTCTGAATAAAGTTCTTGGTGAAGAAAGTCTCCACCATGCTTTCACAGCAAAGCGCACATTATTGGATGGAGACGAGAGCCTGAAAAAGGTTGATAGCTTCTCTAGGTGGATTACTAAAACCCTTGGAGAGGTGGATGATTTGAATATGCAGTCTTCAGCTGGTATTTCATGGGGTACAGATGAATCTGGGCATGTGATAGATGATTCCTCATTGAGCCCGTCCCTTTCTCAGGATCAGCTGTTTAGCATAAATGAATTTTCCCCCAAATGGGCTTATGCTGAAGTGGAAACTGAGGTGGTAATTGTTGGAGCTTTTTTGAAGTATCAACCGGAGGTGTCAACCTCTAACTGGTCCTGTATGTTTGGGGAAGTGGAGGTCCCTGCTGAGGTTTTAACTAATGGAATTCTGTGTTGCCAGGCTCCACCTCATAAGGTTGGACGGGTTCCTTTCTATGTAACATGTTCGAATAGATTAGCTTGCAGTGAAGTGCGTGAATTCGACTATAGAGAAGGCTTTTCTGGAAATGTAGAATTTGCAGATTTTTATAATGATTCAACTGAAAGGCTGCTGCATTTGCGATTGGAAGAGTTTCTGTCCTCAAAACCAGTGTGCCCATCTAAACAAACCTTTGAGAATGATATGGAGAAAAGAGATGTAATTTTAAAGCTTATTTTCTTAAGAGAGGAAGAGGAATTCTCGAGTAAGGAAGAGCAACATCTAGAATCTGATACATCCTCACAGAAGGTGAAGGCGCATCTGTTTCACAGGCAGATTAAAGAGAAGCTGTACTCATGGCTTCTGCACAAAGTAACTGAAAGTGATAAAGGTCCTAATGTGTTAGATAAGGATGGACAGGGTGTTTTACATTTAGCAGCTGCTCTTGGGTATGATTGGGCTATACAACCAATTTTAACTGCTGGAGGTGGTATCAATTTCCGTGATGTGAATGGATGGACAGCCCTACATTGGGCTGCATCCTGTGGCAGAGAGCGGACGGTGGTTGTCCTTGTCACCATGGGTGCAAATTCTGGAGCATTGACAGATCCATCTCCAGCATTTCCAACCGGAAGAACAGCTTCAGAGCTAGCCTCTACCAATGGGCACAAAGGAATCTCCGGTTTCCTTGGTGAATCTTTATTAACTAGTCATCTTGAATCCCTCACAATGGATGATCAATATAAAGGTGGCAGGCAAGAGATTTCAGTAACAAAAGTAGTGCAGACAGTTTCAGAACGAACTGCTACCCCTGTGTTATATGGGGATGATATGCCAGATGATCCCTGCCTTAAGGATTCCCTTACTGCTGTTCGTAATGCTACACAAGCTGCAGATCGTATACATCAGGTATTCAGAATGCAGTCTTTTCAGAGGAAGCAGTTGAATCAACTAGCAGATGATGAGTTTGGCTTGTCAGACCCGCGAGCTCTTTCCCTTCTAGCATCTAAGGCAAGCAAATCTGGACAAGGAGATCGTTTAGCCAATGCTGCTGCAACACAGATACAGAAGAAGTTTCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATCATTCGTCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTTAGGAAGAGTCTAAAAAGCATAATCTGGTCTGTGGGAATCCTTGAGAAAGTGATATTACGGTGGAGACGCAAGGGCAGTGGCTTGCGCGGATTCAAACCCGATGCCCTTAATAAGGCCCCCATTCAACAGAGTGATCCGCCGAAAGAAGATGATTATGATTTCCTCAAGGAAGGAAGAAAACAAAGTGAGGAGAAGTTCCAAAAGGCCCTTTCAAGGGTCAAGTCCATGGTTCAATATCCAGAGGCACGTGCTCAATACCGGCGCCTGCTAAATGTTGTTGACGACTTCCGTCAAACCAAGGCATGTAATATGGATTTAGTAAATTCTGAAGAGACAGTTGATGGTGTGGAGGATTTGATTGATATTGATATGCTCTTAGATGATGACAATTTTATTCCCATAGCATTTGATTGA 3231 0.4271 MAERPSFGLGPRLDFQQLQFEAQHRWLRPAEICEILRNYRMFQITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMTHIVFVHYLEVKGNKTNTGGNIDSYDVSSDSQRTPSPSSGLPTNYSNLPSLSTDSMSPASSLASLREDADSEEIHQASSRLHTLNESQHMRNGHPTDKVDTGDRGQSSISGDYIPVVPAERFGGSDTTYIDGQKAHSMASWDTVLKQCNAELQSDPSFVPFSSIPSSLIGNTVEQERNDFGDLLGSKSSLTEEAGSSQSIQSNWQIPFEESSGRLPNLTQSLSLEFGSDYISGLVGNETLNASSEIDPHLFNFHGEPKEQHVQQHYPERHADGQSQYALQSNSLNKVLGEESLHHAFTAKRTLLDGDESLKKVDSFSRWITKTLGEVDDLNMQSSAGISWGTDESGHVIDDSSLSPSLSQDQLFSINEFSPKWAYAEVETEVVIVGAFLKYQPEVSTSNWSCMFGEVEVPAEVLTNGILCCQAPPHKVGRVPFYVTCSNRLACSEVREFDYREGFSGNVEFADFYNDSTERLLHLRLEEFLSSKPVCPSKQTFENDMEKRDVILKLIFLREEEEFSSKEEQHLESDTSSQKVKAHLFHRQIKEKLYSWLLHKVTESDKGPNVLDKDGQGVLHLAAALGYDWAIQPILTAGGGINFRDVNGWTALHWAASCGRERTVVVLVTMGANSGALTDPSPAFPTGRTASELASTNGHKGISGFLGESLLTSHLESLTMDDQYKGGRQEISVTKVVQTVSERTATPVLYGDDMPDDPCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLNQLADDEFGLSDPRALSLLASKASKSGQGDRLANAAATQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKSLKSIIWSVGILEKVILRWRRKGSGLRGFKPDALNKAPIQQSDPPKEDDYDFLKEGRKQSEEKFQKALSRVKSMVQYPEARAQYRRLLNVVDDFRQTKACNMDLVNSEETVDGVEDLIDIDMLLDDDNFIPIAFD* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0806 1076 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 1076 - -
Ahy20g0806 1076 Pfam IPT/TIG domain 490 568 IPR002909 -
Ahy20g0806 1076 ProSiteProfiles Ankyrin repeat profile. 723 755 IPR002110 GO:0005515
Ahy20g0806 1076 Gene3D - 656 785 IPR036770 -
Ahy20g0806 1076 SUPERFAMILY Ankyrin repeat 680 782 IPR036770 -
Ahy20g0806 1076 SMART CG_1_2 18 136 IPR005559 GO:0003677
Ahy20g0806 1076 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Ahy20g0806 1076 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Ahy20g0806 1076 MobiDBLite consensus disorder prediction 141 242 - -
Ahy20g0806 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 897 950 IPR027417 -
Ahy20g0806 1076 Pfam IQ calmodulin-binding motif 925 944 IPR000048 GO:0005515
Ahy20g0806 1076 Pfam IQ calmodulin-binding motif 902 920 IPR000048 GO:0005515
Ahy20g0806 1076 SMART iq_5 899 921 IPR000048 GO:0005515
Ahy20g0806 1076 SMART iq_5 922 944 IPR000048 GO:0005515
Ahy20g0806 1076 MobiDBLite consensus disorder prediction 141 188 - -
Ahy20g0806 1076 ProSiteProfiles IQ motif profile. 923 947 IPR000048 GO:0005515
Ahy20g0806 1076 Pfam Ankyrin repeats (3 copies) 671 749 IPR002110 GO:0005515
Ahy20g0806 1076 SUPERFAMILY E set domains 490 576 IPR014756 -
Ahy20g0806 1076 SMART ANK_2a 690 719 IPR002110 GO:0005515
Ahy20g0806 1076 SMART ANK_2a 723 752 IPR002110 GO:0005515
Ahy20g0806 1076 Gene3D - 898 946 - -
Ahy20g0806 1076 ProSiteProfiles IQ motif profile. 900 929 IPR000048 GO:0005515
Ahy20g0806 1076 Gene3D Immunoglobulins 483 578 IPR013783 -
Ahy20g0806 1076 ProSiteProfiles Ankyrin repeat region circular profile. 723 749 - -
Ahy20g0806 1076 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1076 - -
Ahy20g0806 1076 ProSiteProfiles Ankyrin repeat profile. 690 722 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0806 Ahy-Chr20 10275571 10284142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0806 1 1057 CAMTA Transcription Factor Family AT5G64220 51.971 0.0 1032
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Ahy20g0806 CG-1 8.60E-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0806 K21596 - gmx:100818124 1570.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0806 20 10275571 10284142 Ahy10g0534 10 5272572 5280870 hybridization
Ahy13g4133 13 140859304 140866998 Ahy20g0806 20 10275571 10284142 PCT
Ahy3g3857 3 137985645 137993325 Ahy20g0806 20 10275571 10284142 PCT
Ahy20g0806 20 10275571 10284142 Ahy13g4133 13 140859304 140866998 PCT
Ahy20g0806 20 10275571 10284142 Ahy3g3857 3 137985645 137993325 PCT