Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0792 ATGAGTTCCTTTCTTTGTGCACCTCTTGGAACAAGAAGAGGAAGAGGTGGTTATGTTGAAGATGGGTCATCAAGACAAGATGTTCCAATTGTGGTGAGAGAGGGTGTTTATTTGACATGGGAGGAGTTGTGGGTGACAATGTCAAAACCAAGTGGAAAGGATGGGAAGAAGGCAATAATCCTTGAAAGCCAAACAGGGTATGCCAAGCCAGGACAGCTTCTTGCTGTTATGGGTCCTTCTGGTTGTGGCAAGACCACACTTCTCGATGCCTTAGCAGGTAGGTTGAATTCAAAAGCAAAACAGACAGGTGATATCTTAATCAATGGACGAAAACAAGCACTTGCTTATGGAACATCAGCATATCTAACACAAGATGATGCTATGTTGACCACACTAACAGTTGAAGAAGCAGTGTACTACTCAGCTCAACTCCAATTACCTGATTCAATGTCCAAGTTTGAAAAGAAAGAAAGAGCTGAATTCACAATCAAGGAAATGGGTTTGCAAGATGCCATTCACACAAGGATTGGAGGGTGTGGTTCCAAAGGCATTAGTGGTGGCCAGAAAAGGAGAGTTAGCATTTGCATTGAGATTATTACACGTCCTAACCTTCTATTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCTTTTTATGTTATGAACAGAATAGCAAGATTGAATAAAACTGATGGCATTCAAAGGACTATTATTGCTTCTATTCATCAACCTAACACTCAAGTTTTCCAACTCTTTCACAACCTTTGTCTTCTTTCTAATGGTAAATTAGTCTACTTTGGCCCTGCTTCTGCTGCGAATAAGTTTTTTGCATTGAATGGTTTTCCCTGCCCAACTCTCCAGAATCCTTCTGATCATTTTGTGAAAGCCATTAATAAGGATTTTGAGCTGGAGGACCCTGAGCAAGGATTAACTGATGGACTTACCACAGAAGAAGCTATTTATATGCTTGTAAAATCATACCAATCATCTGAAATTAGTCAACAAATTCAAACAGAAATAGTTGCCATAAGAACTGGTGATTCTAGTGCAATGGAGAAGAAAAGCAATGCTGCATTCTTTACTCAATGCATTGTTCTTACAAGAAGATCATACTTGAATATGTATCGCGATTTAGGCTACTACTGGCTACGCCTATTCATCTATGGCGCTTTGGCTATATGCCTTGGTACAATTTTCTACAACATTGGTTCAAGCAAAGAATCAGCTCAGGCTAGAGGCTCATTGCTCATGTTTGTGGCCACATTCCTCACTTTCATAACCATTGGTGGATTTCCTTCCTTTGTAGAGGAAATGAAGGTATTTGAAAAAGAGAGACTTAATGGGCATTATGGTGTCACTGCATACATCATTGGACAAACATTATCATCCATTCCATACATATTATTGATATCACTGATACCAGGAGCACTTGTTTATTACCTAACTAATCTTCACCATAGTTGTCAACACTTTGTGTACTTCACTTGTGTCCTTTTTGTTTCTGTGATGTTAGTTGAGAGCCTTATGATGATTGTTGCCAGCATGGTTCCAAATTTCTTGACTGGAATAATCACTGGCTGTGGAATTCTGGGAGTAATGATGTTAAATGGTGGATTCTATAAGTTGCCAAGTGATCTTCCTAAACCAATTTGGAAATACCCTTTATACTACATTTCAATTCACAAGTATGCATACCAAGGATTGTTCAAGAATGAGTTTGAAGGTCTAATATTTACCAACAAAAATAATAATGATCAAGTTGGGGAGCATATGAAGAACATTAGTGGTGAAGAAATGCTAAGAGACTTATGGGAAGTGGAAATGTGTCACTCAAAGTGGGTTGATCTTTTCATATTGTTGGGGATGTTGGTTTTGTATAGAGTCTTGTTCTTGGTGATCATCAAGGCCATGGAAAAAGTGAAGCCTATTGTTGCAGCCTTCAAGTGGAAATAG 1959 0.389 MSSFLCAPLGTRRGRGGYVEDGSSRQDVPIVVREGVYLTWEELWVTMSKPSGKDGKKAIILESQTGYAKPGQLLAVMGPSGCGKTTLLDALAGRLNSKAKQTGDILINGRKQALAYGTSAYLTQDDAMLTTLTVEEAVYYSAQLQLPDSMSKFEKKERAEFTIKEMGLQDAIHTRIGGCGSKGISGGQKRRVSICIEIITRPNLLFLDEPTSGLDSAASFYVMNRIARLNKTDGIQRTIIASIHQPNTQVFQLFHNLCLLSNGKLVYFGPASAANKFFALNGFPCPTLQNPSDHFVKAINKDFELEDPEQGLTDGLTTEEAIYMLVKSYQSSEISQQIQTEIVAIRTGDSSAMEKKSNAAFFTQCIVLTRRSYLNMYRDLGYYWLRLFIYGALAICLGTIFYNIGSSKESAQARGSLLMFVATFLTFITIGGFPSFVEEMKVFEKERLNGHYGVTAYIIGQTLSSIPYILLISLIPGALVYYLTNLHHSCQHFVYFTCVLFVSVMLVESLMMIVASMVPNFLTGIITGCGILGVMMLNGGFYKLPSDLPKPIWKYPLYYISIHKYAYQGLFKNEFEGLIFTNKNNNDQVGEHMKNISGEEMLRDLWEVEMCHSKWVDLFILLGMLVLYRVLFLVIIKAMEKVKPIVAAFKWK* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0792 652 SMART AAA_5 70 259 IPR003593 -
Ahy20g0792 652 Pfam ABC-2 type transporter 363 575 IPR013525 GO:0016020|GO:0140359
Ahy20g0792 652 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 29 648 - -
Ahy20g0792 652 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 29 648 - -
Ahy20g0792 652 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524
Ahy20g0792 652 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 287 IPR003439 GO:0005524
Ahy20g0792 652 Pfam ABC transporter 68 212 IPR003439 GO:0005524
Ahy20g0792 652 Pfam ABC-2 type transporter 244 356 IPR043926 GO:0140359
Ahy20g0792 652 Gene3D - 43 279 IPR027417 -
Ahy20g0792 652 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 277 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0792 Ahy-Chr20 10072391 10075542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0792 68 272 Calmodulin-binding Proteins AT2G36910 26.316 1.26e-08 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0792 20 10072391 10075542 Ahy20g0792 20 10072391 10075542 ECH