Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0780 ATGGTTAAGGATCATATGCCTTGGCCTTGCTCACAGCATATGGCTGGGTCATCACCTTGTTTGAATGTGCCGGAGCCAAACTTGTATGGTTCTTCAGCATATCTGAATCCTAGTACATTCATCTTGCCTGCGGTGAGTGTATTTCCTGGATTTGCGGCTCCTGCTGCCCCATATCTGAAGGCTGAGCCCACCAATGAAGTAGTGCAGGGGTTCCATCAGTATCTTCAGTCATTGCCAACTTTGAAAGAAATGCATACTGAAGAGGCTATGCAACTGCAAAATGCAAATTCTGTATCTTTGCAGAAGAAGTTACTTATTTTCGACCAATCTGGTAATAAGACAAGGTTGTTTTATAGTTCTGTCTTGCCTCAGTTCCAGAGTCAAGTTGTTAATGCTACGCCATATGTATACAAGGACGAAAAGGCAGCTAATTTGGGTCAAAAGCATCTACCGAACAGTTCAACAGAAGAGTCTGATAATGATCATATAGTTAATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCCTTGCTTTATTCTGATGATTCTGATTTCAGTGGCGATGATGATGATGAGGTAACAAGTACAGGCCACTCTCCATTGGTTACTAAAAGGACTTATGTGATGCAAGAGCAGTATGAGGATTCAAAGGAGGAGGTTGCGAGCTCTGGTTTGCCAAACAAAAGGCGGAAGTCAATTAATGGCGAGTACTATAGATCACCAATGCCTGCAGGTACTGCGGGTTTAGCAAGACTAAATGATACCTATGAGCATGCCAGCGACGCTGAATCAAAATATTCCAGTGGCCGTGTGTATTCTGGAGGTGCTGAGCAAACTAAAGACAATAGTTCAATGGTGGATGATATTCAACTGAAAAGGGATAAAATCCGGGAATCATTGAGAGTACTTGAGAACTTAGTTCCTGGTGCAAAGGGAAAGAATCCACTGTTAGTCATTGATGAAACAATTGAGTACTTGAATTCTTTGATGACTGGTACTTCCGGAGAAGATAATATCACCAAAGGCTCATCGCCGCCATAG 1050 0.4219 MVKDHMPWPCSQHMAGSSPCLNVPEPNLYGSSAYLNPSTFILPAVSVFPGFAAPAAPYLKAEPTNEVVQGFHQYLQSLPTLKEMHTEEAMQLQNANSVSLQKKLLIFDQSGNKTRLFYSSVLPQFQSQVVNATPYVYKDEKAANLGQKHLPNSSTEESDNDHIVNEESEMHEDTEEINALLYSDDSDFSGDDDDEVTSTGHSPLVTKRTYVMQEQYEDSKEEVASSGLPNKRRKSINGEYYRSPMPAGTAGLARLNDTYEHASDAESKYSSGRVYSGGAEQTKDNSSMVDDIQLKRDKIRESLRVLENLVPGAKGKNPLLVIDETIEYLNSLMTGTSGEDNITKGSSPP* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0780 349 MobiDBLite consensus disorder prediction 216 242 - -
Ahy20g0780 349 MobiDBLite consensus disorder prediction 274 288 - -
Ahy20g0780 349 PANTHER TRANSCRIPTION FACTOR BHLH145 10 334 IPR037546 -
Ahy20g0780 349 Coils Coil 289 309 - -
Ahy20g0780 349 MobiDBLite consensus disorder prediction 261 291 - -
Ahy20g0780 349 PANTHER TRANSCRIPTION FACTOR SAC51 10 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0780 Ahy-Chr20 9977752 9981325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0780 99 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 36.327 1.24e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0780 - - adu:107468645 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0780 20 9977752 9981325 Ahy10g0504 10 5038257 5041600 hybridization