Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0779 ATGGGAGTGGAGAAGCAATTGGTGAGGCCCGGCACCGGTCCCAAGCCTGTTCCCGGTCAGAACGTCACCGTTCACTGCACTGGCTATGGGAAAAATGGTGACCTCTCCCAGAAATTTTGGAGCACAAAGGATCCAGAGCAGCAACCTTTTAGTTTCAAGATAGGGCAGGGATCTGTTATTAAGGGATGGGATGAAGGTGTTCTTGGCATGCAAGTCGGTGAAGTGGCTCGTCTCCGGTGCTCCCCTGATTATGCTTACGGTTCTGGTGGCTTCCCTGCCTGGGGGATACAGCCCAACTCTGTTTTGGAGTTCGAAATTGAAGTCCTCAGTGCCCAGTGA 339 0.528 MGVEKQLVRPGTGPKPVPGQNVTVHCTGYGKNGDLSQKFWSTKDPEQQPFSFKIGQGSVIKGWDEGVLGMQVGEVARLRCSPDYAYGSGGFPAWGIQPNSVLEFEIEVLSAQ* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0779 112 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 112 IPR001179 GO:0003755
Ahy20g0779 112 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 111 - -
Ahy20g0779 112 SUPERFAMILY FKBP-like 2 110 - -
Ahy20g0779 112 Gene3D - 1 112 IPR046357 GO:0003755
Ahy20g0779 112 MobiDBLite consensus disorder prediction 1 22 - -
Ahy20g0779 112 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 14 109 IPR001179 GO:0003755
Ahy20g0779 112 PANTHER PEPTIDYLPROLYL ISOMERASE 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0779 Ahy-Chr20 9971996 9972969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0779 3 110 Calmodulin-binding Proteins AT3G25230 30.631 4.26e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0779 K01802 - gmx:100305505 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0779 20 9971996 9972969 Ahy10g0503 10 5023102 5024054 hybridization