Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0771 ATGGAAGGGGGGAATAGGGCGGAAGCGGAGCGGTGGCTGTACACGGCCAACAAGCTCCTGAGTGCACGTGACCTGCATGGAGCTCGGTCATTTGCCATCAGGGCCCGCGAGTGTGACCCACGCTTTGAAGTCACGGAGCTACTTCTCACCGTAATCGACACCCTCGTGGCCGGCGAGGCCAGGATCAACGACCTCGTTGACTGGTACAGCATTCTCCAGGTTATTCGCTACTCACATAATCTCGACTACATCGCCGCCCAGTACCGCCGTCTCGCTGCCATTCTTGATCCACACCGCAACCCTTTCGCGTTCTCCGCCTACGCCTTCTCCCTCGTCAACGACGCATGGTCCGTACTCTCAAACCCTTCCAAGAAAGCAATCTTCGATAACGACCTCAGGCTCCTTACCGAACCTCCTCCTCCTCCTCCGCCTCCTCCGCCCCAACCCGCCCCTGTTCCTATCGTCCCTCAAGCTTTTCCAATCTTGCAGCAGAGGCATAATCTCAACAACCACCAAAACAATCATAATCAAAGCCACGACTTGAACCAGAACCAGAACCACTTCCTCCACCAGAATCCGAATCAGAATCAGAACCACCTCATCAACCAGAATCAGCAGCAGCGACAGCGTCAGCAGCAGCAGCAACAACAACAAGAGGAGGAACGGCAAAGGCAACAACAAGAGGAGGAACGGCGAAGGCAACAACAAGAGGAGGAACGGCAACGGCAACAACAAGAGGAGGAACGGCAAAGGCAACAACAAAAGGAGGAACGGCAAAGGCAACAACAAGAGCAAGAGCAAGAGCAACAGAAACGGCGAGAACAAGAACAAGCGCTGCAACTTCAACGGCAACAACAAGAGCACGAGCAATGGAAACGGCAACAACAAGAACAGGCGAAACTGCAACTGCAACGGCAACAGCAACAGCAGCAGCAACTGTTTTCACTGAGTAAGAACGCTATATCGACGGAAGCTCCCAGGGTTGTGGTGGTTGAGGAGGAGGAAGAGGAGGAGAGGCCGAGTCAGGACAATGTGACTCAGCTGACTGAGCCAACTCGGCCGGCTAGGGCTACTGAGTCGATTGAAACCGAGTTGAACGGAGCTTTCTGGACTGCGTGCCCTTACTGTTACGGTTTGTTTGAGTATCCGAAGGTGTACGAGGAGTGTACCTTGCTGTGCCAGAGCTGCCGGAGGCCTTTCCATGCGTTGGCGGTGAGGTCGCCGCCGGAGTTGACCGGGAAAGACGGGTTCATGTCCTTCTGCAGTTGGGGTTTTATGCCGCTAGGGTTTTCTGGTGATTTCAAGGATATAAGTGGTTCTGCTTCTCAATGGAACCCTTTCTCTGCTTTGGTTCCTTGTCCTCTCAAAGGTGCTGACAGATGGAGACATCTGAGAGGGCCTTGGGCTTACTATGATGATGAGGCTGCCGCCGCGTTTGTCGAGCATTCCGATACCACGGAAGATGATTCTGATGATGATGATTGGAGGAATATTAATGCGAATAAGAAGGTGGGGAGGAAAAGAAGAAGAAGAAGAAGGAATAGGAAGAGTTCTGCCACCACTGCTGGTGGCAATGCAAGCACACCAGTGGAGAGGCCTAGGAGAGGGGTTCGTAACCGTGCTGGCAATGCTGGTGTGGAAAATGGTGAGGCTGTTGGTGCTGGCTCTGCAGCAGTGCCCATTGCAGCTAGGCTAGAATCTGGCAAGAAAGCTGCATTGGCAAGTTTGAGGAGGAGGGGTGCTGGTAATTTGGGGAAGTTGGATCTGAATGTGGAGTTTAGTAATGATGTGGAGGAGACTGGCCATGGAGTACGCGATAGGGCGAATGCAGGTGGGACGGGTAATGCGGAGGATAACATTGAAGGGATTGGGTTTTTTGAAGGGCTTGATGAGTTCTTGAGCAGCTTGCCTATTCTCAATGCTGTTGCAGATGATAAGGTTAAGGGTCATTAG 1953 0.5284 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARECDPRFEVTELLLTVIDTLVAGEARINDLVDWYSILQVIRYSHNLDYIAAQYRRLAAILDPHRNPFAFSAYAFSLVNDAWSVLSNPSKKAIFDNDLRLLTEPPPPPPPPPPQPAPVPIVPQAFPILQQRHNLNNHQNNHNQSHDLNQNQNHFLHQNPNQNQNHLINQNQQQRQRQQQQQQQQEEERQRQQQEEERRRQQQEEERQRQQQEEERQRQQQKEERQRQQQEQEQEQQKRREQEQALQLQRQQQEHEQWKRQQQEQAKLQLQRQQQQQQQLFSLSKNAISTEAPRVVVVEEEEEEERPSQDNVTQLTEPTRPARATESIETELNGAFWTACPYCYGLFEYPKVYEECTLLCQSCRRPFHALAVRSPPELTGKDGFMSFCSWGFMPLGFSGDFKDISGSASQWNPFSALVPCPLKGADRWRHLRGPWAYYDDEAAAAFVEHSDTTEDDSDDDDWRNINANKKVGRKRRRRRRNRKSSATTAGGNASTPVERPRRGVRNRAGNAGVENGEAVGAGSAAVPIAARLESGKKAALASLRRRGAGNLGKLDLNVEFSNDVEETGHGVRDRANAGGTGNAEDNIEGIGFFEGLDEFLSSLPILNAVADDKVKGH* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0771 650 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 154 - -
Ahy20g0771 650 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 342 650 - -
Ahy20g0771 650 Pfam DnaJ domain 67 129 IPR001623 -
Ahy20g0771 650 MobiDBLite consensus disorder prediction 482 548 - -
Ahy20g0771 650 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 154 - -
Ahy20g0771 650 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 342 650 - -
Ahy20g0771 650 MobiDBLite consensus disorder prediction 215 278 - -
Ahy20g0771 650 MobiDBLite consensus disorder prediction 135 154 - -
Ahy20g0771 650 Gene3D DnaJ domain 63 133 IPR036869 -
Ahy20g0771 650 SMART dnaj_3 66 124 IPR001623 -
Ahy20g0771 650 MobiDBLite consensus disorder prediction 332 356 - -
Ahy20g0771 650 MobiDBLite consensus disorder prediction 169 214 - -
Ahy20g0771 650 MobiDBLite consensus disorder prediction 502 517 - -
Ahy20g0771 650 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Ahy20g0771 650 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Ahy20g0771 650 CDD DnaJ 67 121 IPR001623 -
Ahy20g0771 650 Coils Coil 194 313 - -
Ahy20g0771 650 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Ahy20g0771 650 MobiDBLite consensus disorder prediction 169 281 - -
Ahy20g0771 650 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0771 Ahy-Chr20 9907924 9910724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0771 365 649 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.781 1.76e-56 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0771 - - aip:107623843 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0771 20 9907924 9910724 Ahy10g0496 10 4993186 4995099 hybridization
Ahy3g2899 3 125250392 125252337 Ahy20g0771 20 9907924 9910724 PCT
Ahy20g0771 20 9907924 9910724 Ahy3g2899 3 125250392 125252337 PCT