Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0732 ATGGACGAAGCTTCGTTGATGCGCAACACCGATTGCGTTTATTTCTTGGCCTCTCCCCTCACTTGCAAGAAGGGAGCTGAATGCGAGTATCGGCATAATGAGATTGCGAGGCTTAACCCTAGGGATTGCTGGTACTGGTTATCTGGCAGTTGCCTTAATCCAACATGTGCTTTCAGGCACCCTCCATTGGATGGCCAGACTGGAGTTTCATCTGAGCCAACACAGTCTGCTGTGCCTGCAAATAAGACAATGGTTCCCTGTTATTTTTTCTTCAATGGATATTGCAATAAAGGCGACAGATGCTCATTTTTGCATGGGCATGATGACAGCCATTTCACTGTAAAGCCTGTAAAGAATGACAAAGGAGGCACTGATCCACCCAACCTAGAGAATAAGGTGTTGTCAGGAACTGCCCCATCAACAACTGAAACTCAGTTGAACCCGTCGTTAACTGCCCCAAAGGCTTTGCCCACTTTCAAGCCTCCACCTAAGGAAGATCTTCAACTATCCTTACCAAAAAATGTTAAACAGCAAGGTGATTTCCCTACATATGTTAAACAGCAAGGTGATTCCCCTACATATGCTGTTGAGTATGAAGAAGCTACAGTTGCAGGGTCGGAGTCTCCGTATCCAGAAGGAAGATTTGTTGATAACATCTCTCAACGATGCAGTGAGCAGGGTTCAGAGGAGCAAGTAAATGGTCACATCGAGCCTGATGAACGTTGGGAATCATCATCCCCTGGATTTGATGTTCTTGTTCATGATGAATCGGCAAACTTGGGCTATGAGGAGGATCCTGAATATCTTCCTGATGGGGAACATGAGGAACTGAATGAACAATACTTGGGGTATGAATTTGAGAACCCAGTTGAGTATGACAATATGTGCCGCAAAGCTGACATCCTGTATGAACAAGAAATGTATGATGATTATAGACGTTTAGATAGAGATCTTACTCGTGCTAATGGCAGAAGAGTTTATGATTGTTCCAGTGATATAATCTTAGATTCTATGTTGACTAGGAAAAGGATTCAGATGAGCGATATAGCTACCTGTGATGGGAAGTTAGATCTACGAGACCATCTGAGAAGACGAAGGGAAAGTAGTGGTCCACCTGATGCGAGTTTCATCAGACGACATGAATCCTCTTCTTTGATGGTTCGAAACCGGGAAAGGCATCAAAGGCATTACAATGAACAGAGACTAAGGGGAAGATTGTCATCGCAAGTGGGACTTACCACTATAGACCCCATTGGAGAGGTTGAAACTCTTTCAATTGCTAACAAGCCAAGGTTATTTAGGAATTCCCAGCAGCATTGGCCAAGGAAGCATTATAGAGAAAAGCCAGCTAAACGCCAGTTTCATTCATCTAATGACTCCAGGAGACCAGTTTTCAAGCAAAGGAGATTTGTTCACGAGTCCTCTACATTTTCAGGACCCAAGAGCCTTGCAGAAATTAGAGAAGAGAAGAAAAAGGCTGCAGGAAGTTTTCACTGCAAAAGCACATCACCTGATTTTCAGGACCCCAAACCTCTTAGTGAAATTCTCAAGGGCAAAAGGAGTGTGGACGGAGTTGGAGATGTCAATGTCTGCAGCAACTGA 1602 0.4407 MDEASLMRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGSCLNPTCAFRHPPLDGQTGVSSEPTQSAVPANKTMVPCYFFFNGYCNKGDRCSFLHGHDDSHFTVKPVKNDKGGTDPPNLENKVLSGTAPSTTETQLNPSLTAPKALPTFKPPPKEDLQLSLPKNVKQQGDFPTYVKQQGDSPTYAVEYEEATVAGSESPYPEGRFVDNISQRCSEQGSEEQVNGHIEPDERWESSSPGFDVLVHDESANLGYEEDPEYLPDGEHEELNEQYLGYEFENPVEYDNMCRKADILYEQEMYDDYRRLDRDLTRANGRRVYDCSSDIILDSMLTRKRIQMSDIATCDGKLDLRDHLRRRRESSGPPDASFIRRHESSSLMVRNRERHQRHYNEQRLRGRLSSQVGLTTIDPIGEVETLSIANKPRLFRNSQQHWPRKHYREKPAKRQFHSSNDSRRPVFKQRRFVHESSTFSGPKSLAEIREEKKKAAGSFHCKSTSPDFQDPKPLSEILKGKRSVDGVGDVNVCSN* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0732 533 SUPERFAMILY CCCH zinc finger 81 106 IPR036855 GO:0046872
Ahy20g0732 533 ProSiteProfiles Zinc finger C3H1-type profile. 6 35 IPR000571 GO:0046872
Ahy20g0732 533 MobiDBLite consensus disorder prediction 363 399 - -
Ahy20g0732 533 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32-LIKE 1 521 - -
Ahy20g0732 533 Pfam Zinc-finger containing family 8 64 IPR041686 -
Ahy20g0732 533 SMART c3hfinal6 7 34 IPR000571 GO:0046872
Ahy20g0732 533 SMART c3hfinal6 39 62 IPR000571 GO:0046872
Ahy20g0732 533 SMART c3hfinal6 81 107 IPR000571 GO:0046872
Ahy20g0732 533 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 84 106 IPR000571 GO:0046872
Ahy20g0732 533 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 1 521 - -
Ahy20g0732 533 MobiDBLite consensus disorder prediction 487 510 - -
Ahy20g0732 533 ProSiteProfiles Zinc finger C3H1-type profile. 81 108 IPR000571 GO:0046872
Ahy20g0732 533 MobiDBLite consensus disorder prediction 383 399 - -
Ahy20g0732 533 Gene3D - 72 132 - -
Ahy20g0732 533 Gene3D - 2 63 - -
Ahy20g0732 533 MobiDBLite consensus disorder prediction 437 464 - -
Ahy20g0732 533 ProSiteProfiles Zinc finger C3H1-type profile. 37 63 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0732 Ahy-Chr20 9069506 9072591 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy20g0732 zf-CCCH_3 4.60E-11 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0732 - - adu:107469835 999.579