Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0689 ATGGAGGTGTCTTTGAGCCAGGAGGATGCTGATCGTGGAGGGAGTGATGGTGATGCTTACGATGTAGAAAATTTTGAGTTGGAAGACCTTGCCGGACTAAGTGTGAATGACATCCTTAAGAAGGTATGGGATAGCGTTGATAATGCATATGAGTTCTATCGGGGTTTCGGAAAATTGGATGGATTCGGTGTGCGAAAGGGTGACTCCGGAAAAGACTGTGAGGGGAATCTTGTAAGGTACAGGTTTTTTTGCAACAAGGAAGGCTTCAGGGAGCGTAAACACTACGACAGGGTTGACAGAATGAGGGTACACAAACCAGAAACAAGAACTAACTGCAAAGCAATGTTATCGGTTTATTTAGACAAAAATGATCAGTATTGGAAGGTTAGGAAGTTAGTAACCAAACACAATCACGACCTGACACCGGCAGGAATGGTGCACTTGATTGCCAACCATCGTCGGTTAACGGAAGTTGCAAAGAGTCAGATAGTTGGGATGGAAGCACATGGTATTGTGACCTCTAAGATTGTAGGGTACATGGCTGGTATGGCCGGGGGATATTCGTTGTTGGGGTTCCTGAAGAAGGATGTCTATAATTATGCTGACAAAATGCGGCGCATTAAAATAGTTGATGGCGATGCGAATTCTGCATTAGTATATCTAGAGGGAAAAGCCGAATCAGACCCCATGGCAATCGCAAAATATAATGTGACCACTGACAACAGGCTGGCGAATCTGATTTGGGCCGACGGATGTAGCAGAGTCGATTACCAATACTTTGGCGATGTGTTGGCGTTCGATTCAACCTACAGGAAAAATAAATACAAGAGACCTGTTGTGATTTTCTCTGGATCAAACAATCATAAGCAGACCACCATATTCAGGTTTGGGATGTTGCATGACGAAAGTCTAGCATCCTATCGGTGGATGCTGGAGAATTTGATGGAGATTATGTGTCGCAAGAAGCCATCTGTAGTGGTTACCGTTGGGGACAAAGCTATGATCAAAGCCGTGTCTGAAGTCCTCCCCGAGTCGACGCATCGGTTGTGTGCATGGCATGTGGAGAAGAATGTCACATCGAATGTCAAGGATGATGATTTACGTGGGCTGTTTAGAAGGTGGTTGTACGCGGACATGACGACAGATGTATTTGAGTCGGAATGGGAGCAGGCTGCCGAGGACTATGGCCTCTGCCAGAAGCAGTGGTGGTGCCAAATGTATGAGAAAAAGGAGATGTGGGCAAGTGCTTATCTCCGTGACAAGTTCTGCACGGGGTACCGGACCACATCTCGCTGTGAAGAAATTAACGCATATGTGAACAAGTTTTCCAAATCCACCCACACAATTTTGGAGCTGGTGCAATGCTTAGATATGGTTGCCCGTGAATATCGGAATAAGGAAATGCTTCTCCAGTTTAAATCCATAAACTCGGTTCCGGTCATGACAACATGCCTTAGAAGTCTTGAACGACATGCCGCTTCAGTGTACACCAGATAA 1497 0.4562 MEVSLSQEDADRGGSDGDAYDVENFELEDLAGLSVNDILKKVWDSVDNAYEFYRGFGKLDGFGVRKGDSGKDCEGNLVRYRFFCNKEGFRERKHYDRVDRMRVHKPETRTNCKAMLSVYLDKNDQYWKVRKLVTKHNHDLTPAGMVHLIANHRRLTEVAKSQIVGMEAHGIVTSKIVGYMAGMAGGYSLLGFLKKDVYNYADKMRRIKIVDGDANSALVYLEGKAESDPMAIAKYNVTTDNRLANLIWADGCSRVDYQYFGDVLAFDSTYRKNKYKRPVVIFSGSNNHKQTTIFRFGMLHDESLASYRWMLENLMEIMCRKKPSVVVTVGDKAMIKAVSEVLPESTHRLCAWHVEKNVTSNVKDDDLRGLFRRWLYADMTTDVFESEWEQAAEDYGLCQKQWWCQMYEKKEMWASAYLRDKFCTGYRTTSRCEEINAYVNKFSKSTHTILELVQCLDMVAREYRNKEMLLQFKSINSVPVMTTCLRSLERHAASVYTR* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0689 498 Pfam FAR1 DNA-binding domain 51 141 IPR004330 -
Ahy20g0689 498 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 497 IPR031052 GO:0006355
Ahy20g0689 498 PANTHER OS02G0262500 PROTEIN 36 497 - -
Ahy20g0689 498 Pfam MULE transposase domain 263 357 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0689 Ahy-Chr20 8085705 8087201 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g0689 MULE 5.40E-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0689 - - aip:107620053 1026.16