Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0672 ATGGAAGATTACAATTTTGCTATGAAAAGGATGACGAGGAATCCTTATGAGTATCACCACGATCTGGGTATGAATTACACACTTATAATTGACAATCACATTGTGGGATCCCAACCACAGAAACCTGAAGACATCGATCACCTCAAGAAGGAAGAGGGTGTGACATACATTCTGAATTTGCAGCAAGATAAGGATGTAGAATATTGGGGAATAGACTTGAAGTCGATAACAAGGAGGTGCCACGAACTCGATGTTCGACATATGAGGAGGCCGGGAAAAGAAAGAGTTTACGTGCATTGTACTGCTGGACTTGGGAGAGCACCAGGGGTGACAATAGCGTATTTGTTCTGA 351 0.4274 MEDYNFAMKRMTRNPYEYHHDLGMNYTLIIDNHIVGSQPQKPEDIDHLKKEEGVTYILNLQQDKDVEYWGIDLKSITRRCHELDVRHMRRPGKERVYVHCTAGLGRAPGVTIAYLF* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0672 116 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 92 116 - -
Ahy20g0672 116 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 1 93 - -
Ahy20g0672 116 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 22 115 IPR029021 -
Ahy20g0672 116 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 74 116 IPR000387 GO:0016311|GO:0016791
Ahy20g0672 116 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 1 93 - -
Ahy20g0672 116 Gene3D Protein tyrosine phosphatase superfamily 95 116 IPR029021 -
Ahy20g0672 116 Gene3D Protein tyrosine phosphatase superfamily 18 91 IPR029021 -
Ahy20g0672 116 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 92 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0672 Ahy-Chr20 7460434 7462906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0672 1 116 Protein tyrosine phosphatase (PTP) family AT3G10940 66.197 5.34e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0672 - - gmx:100787079 198.364