Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0628 ATGTTGAGTTTTGTTCCAATTCATATATTCTTGTGGTCATTATTGTTCTGTTTCTTCATGATTGTTTATGGAGCTGAATTAGGTGACATCAATTGCCTAAGAGAAATCAACAACTCATCGGACTCATCTAATCAAATATGGGATTTCAATTTCAATATCAACACCATAGATTTGTGCTCATCATTCACTGGTATTGAATGCATGAACAGTGGTATTGATGAAGAAAAAGTAATAAGTCTCAAGCTTTCCAACATGGGGTTAGAAGGCCAATTTCCTCATTGCATTGAGAATTTCTCATGGCTGCAGAATCTGAACCTTTCACACAACAAGCTCTTTGGGAATATCCCACCTGATATTTCAAGTAAGCTTCCATATCTAACCTCACTTGACCTATCAAACAACAACTTTTATGGGGAAATCCCAAAGGCTATTGCAAACTTGTCTTACTTGAATACCCTTAGACTTGATGGTAACCAGTTAAAAGGAACAATCCCAAAAGAACTTGGCTTTCTTCCAAGGATCACAGTGTTCAGTGTTGCAAACAATTTGTTATCAGGGCCAGTGCCTGTGTTTGTGAACAATAATGTTGATGTTAGCTTGAGCTATGTCAATAATAGTGGACTCTGTGGGGGAACAACATTGGGAAGTTGTGATGAAGAGAGCTTATTTGGTAAACCCTTTTGGTATAGTTTTGTTATTGCTTTTGTTTGTTCAGCAACTTCTGTCATAGTAACTTTCATGGACTATACTCAACCTTGGAAAGAATTCAAAAAGAGTAGTAAGAAGAGTAACACCATATATCCCTTGAGAAAAGAACTGAACAATCAAAAGCATACCACTAATGTAGCTCAATTGCTTCCACTGGCTTTGCAAGAGGAAGGAAATAAAGAGCTCTGTAGATTGTTGGAGAGATTGATACCAAGAATGAGCTTCATGGAGCTTTGCAAAGCAACTAACTACTTTAGCTCAAACAACATCATGGGGTTAGGAACAACAGGGATAATGTACAAGGCAGAGGTACCAAATAACTGTCTGATAGCAGTTAAGAGATTCTATGATTCTGAAAAGTACAAGAGACAATTCTTGCTTGAAACAATGATTCCAGGGAGACACATGCACCGAAACATAGCCTCTCTGCTTGGATTCTGCATAGAGAAGAAGGAGAGGATACTAGTCTACAGCTACATCTCAAATGGAACATTATGTCACTGGTTACATAATTCTCAATTGGAATGGCCTGAGAGGATTCACATTGCAATTGGGATAGCAAGGGGATTATCTTGGCTTCACAAAAAGTGCAACATCATACACCTCAATCTATCTTCTGAATGTGTCTTGCTAGACAAGAATTTCGAGCCAAAAATTTCGAATTTCGGCAAAGCAAAGTTCATCATGAACCAAAAGAATCATGCAAGGATGAGACTGTTTCTGGTTGATGAAGTCATTGGGGTGAAGGGTTCTTTTGAGAAGGATATCTATGACTTTGGAATAATCCTTTTTGAGCTTATAACAGGACAAAAATTAAGCCTAAGTAGTGATTCTTATTCTACTAATTATGATGATGACATTGGTGTTGATAATAGCTCTTTGAGGAGCTATATTAGCAATAGGTTGTTCACTGATCCTAGTGATTTTTATTATGCCACTGATAAATGCATAACTGGGAAAGGGTTTGATGATAAAATTCATGGCCTCCTAGAAGTTGCATGCAAATGTGTTAAACCTTCTATGGAACAGAGGCTGAAGATGGATTATGTGTATAGAACTATTGCAGCCATGTGGAAAGGTTGA 1791 0.3752 MLSFVPIHIFLWSLLFCFFMIVYGAELGDINCLREINNSSDSSNQIWDFNFNINTIDLCSSFTGIECMNSGIDEEKVISLKLSNMGLEGQFPHCIENFSWLQNLNLSHNKLFGNIPPDISSKLPYLTSLDLSNNNFYGEIPKAIANLSYLNTLRLDGNQLKGTIPKELGFLPRITVFSVANNLLSGPVPVFVNNNVDVSLSYVNNSGLCGGTTLGSCDEESLFGKPFWYSFVIAFVCSATSVIVTFMDYTQPWKEFKKSSKKSNTIYPLRKELNNQKHTTNVAQLLPLALQEEGNKELCRLLERLIPRMSFMELCKATNYFSSNNIMGLGTTGIMYKAEVPNNCLIAVKRFYDSEKYKRQFLLETMIPGRHMHRNIASLLGFCIEKKERILVYSYISNGTLCHWLHNSQLEWPERIHIAIGIARGLSWLHKKCNIIHLNLSSECVLLDKNFEPKISNFGKAKFIMNQKNHARMRLFLVDEVIGVKGSFEKDIYDFGIILFELITGQKLSLSSDSYSTNYDDDIGVDNSSLRSYISNRLFTDPSDFYYATDKCITGKGFDDKIHGLLEVACKCVKPSMEQRLKMDYVYRTIAAMWKG* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0628 596 Gene3D Phosphorylase Kinase; domain 1 284 395 - -
Ahy20g0628 596 Gene3D Transferase(Phosphotransferase) domain 1 397 595 - -
Ahy20g0628 596 ProSiteProfiles Protein kinase domain profile. 321 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0628 596 Pfam Leucine rich repeat 101 160 IPR001611 GO:0005515
Ahy20g0628 596 SUPERFAMILY L domain-like 47 208 - -
Ahy20g0628 596 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 6 592 - -
Ahy20g0628 596 Gene3D Ribonuclease Inhibitor 30 219 IPR032675 -
Ahy20g0628 596 PANTHER RECEPTOR-LIKE PROTEIN 55 6 592 - -
Ahy20g0628 596 SUPERFAMILY Protein kinase-like (PK-like) 302 588 IPR011009 -
Ahy20g0628 596 Pfam Protein kinase domain 323 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0628 Ahy-Chr20 6810324 6812928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0628 14 593 Receptor kinase-like Gene Family AT3G28450 32.053 2.62e-89 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Ahy20g0628 Pkinase 1.40E-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0628 - - ahf:112717205 1157.13