Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0581 ATGGTTGATTTGATCGGAGAGTCATCGCATAACCAAATAGAGAATGTTTCAGCTGAGGAAATGGACGAATTGTTAGTTGATAGTGATGGCAATGATGTTGAAGACCTGTTACTGAATAGTATAGGAAGTATCGGTCGGGTTAATTTCGTAGGTTTGAGCGTTGATGCTGCTAAGAAGTATGTATTTTCAGACCTTGATGTTGCGTATGCCTTTTACAATGCATTTGGGAGGGTCAATGGATTTTCAATTAGGAAGTTCAAGGTTGGGCGAAGTGAGATTGATAAGCGCATACTCTGGCAAACATTTGTGTGTTCGAGACAAGGATATCGTATTTTCAGAGGGGTTGATGAAACAAATAGGAAGAGAGCTCCAAAGCCAGAGACTAGGTGTGGGTGTGTAGCACAAATGCAAGTTCACATAGATGTTGGCAGGGACTGGTGGTATACAACATTATTTCAAAATGAACATAATCATGAGTTAGTACCCCCAACTTTGAGCCGGATGTTGAGATCGCAACGGAGAATGACTGATCAAGAAATTCAAAGAATGAACGACATGAGAGATGCTGGAATTCCCACAACCCAAATCTATATGCATTTTGCCGAGCAATCTGGTGGTTTTGAGAATGTTAGATTTCAAAGAAAAGACATGTACAACCAAATAGAAAAGCAAAGGCAATTGATGGAAAGCGATGTGACCGAAACGTTGAAGTACCTAAAGAAGCGGAAGAAATTAGATCCAAAGTTTTACTGGAGTTACGAGGTGGATAACAATGGTGTGTTTCGGCACCTAATCTGGATGGACGGGAAGAGCCGTGTTGACTTTGAAGTATTTGGTGATGTTATGGCCTTTGATGCAACTTACAAGAAAAATAAGTACAAGTTTCCATTGGTAGTTTTCTCAGGAGTGAACCATCACCTTCAAACAATAGTTTTTGGCAGTGCAATTGTGGCTGATGAAGGAGAAGGAACTTACATATGGTTGTTACAGAGATTCGTGGAAGCAATGAATGGTAAACGACCAAATGCTGTAATAACTGATGGTGCCAAGGCTATGAAGCTTGCAATTGAAAAGGTATTTCCAGATGCACACCATAGGTTGTGCGGATGGCATTTGTTAAGAAATGCCACAGCCAATGTCTCCAACCCCAAGTTTACCCAACAATTCAGGAAATGCATGCTTGGCGATTATGAGATTGATGAGTTTGAGGAGAGGTGGGTGTCAATGGTTAATAGTTTTGGGGTTAAGGATATGGAGTGGGTTGAGACCACTTATGGGATTAAAGATATGTGGGCTACAGCACATATGAGAGGCAAGTTCTTTGCCGGGTTGAGAACTACATCGAGGTGTGAGGCACTACATTCGCAAGTTGCTAGGTTTGTAAAATCTGGCTATAGTATTAAGGAATTCCTCCATCACTTCCGCCGGTGGATGGGTTTGTTGCGGAATAATGAGGCTGAGGCTGACTATTACACCTCATACGGGTATCCGATAATGCAAACACAGGTGCAAGCATTGGAGCGATCAGGAGCAAGTGTTTATACAAGGGAGGTGTTCTACTTGTTTCGATCATTATTGTTGAAAGCGTCAAGTGTGATAATAGTTGATTGGCGAGAGACTTCATGTAGTGTGAACTATGATGTACGAAAATATTGTGAGTTAACACGAAAATGGGTTGTATCTTATTGGCCTGGTAGCAGTGAGTTTAGGTGTTCATGTCAACGAATGGAGTCATTTGGCATTCCATGTGTTCATATCATTCGTCTGTTGATATATCTTCAAATTACAGAATTACCTGAGTCACTGATATTGAAGCGATGGACCATGAAAGCAAAAGAGGCTCATATAAGGTTGGAGCAGCAGGGATCGTTAGTTGGAGATAGAAGTTATGAGAGTAGGATTGCTGCTATGAATGATGAGCTGGAGGGCTTGCCATTTGCTGCTTGCGGAGATTTAGGTGATTTCAAGGATGTTATGGAGTGGGTCAGAAACAAAAAGGCTGAATTATTTGCCAAACATGAAAAGAATAGAGAGGGAAGTTCTAAAAGTGCGGGTGAGAAATTCAAAACACGGACGGATGCTATTTCAAAAGAAGCTGGGGACAAAAAGAAAAAGCGAAGGATTCGGTGCAGCAGATGTAACGGTATAGGACACAATCGGCGAAATTGTCGCCGTGGAGATGACCATAATCAAATGGAAAGTGGAGACGGAGGAGGTCCCGAAGATGATGACGATTGGTCTAGTCAAACCAGCGAGGAGGGGATCGAAGAAATGGATTTTGATGTCACCATTGGTAATCAGAAAGGCAAGTATCGTTAG 2319 0.4187 MVDLIGESSHNQIENVSAEEMDELLVDSDGNDVEDLLLNSIGSIGRVNFVGLSVDAAKKYVFSDLDVAYAFYNAFGRVNGFSIRKFKVGRSEIDKRILWQTFVCSRQGYRIFRGVDETNRKRAPKPETRCGCVAQMQVHIDVGRDWWYTTLFQNEHNHELVPPTLSRMLRSQRRMTDQEIQRMNDMRDAGIPTTQIYMHFAEQSGGFENVRFQRKDMYNQIEKQRQLMESDVTETLKYLKKRKKLDPKFYWSYEVDNNGVFRHLIWMDGKSRVDFEVFGDVMAFDATYKKNKYKFPLVVFSGVNHHLQTIVFGSAIVADEGEGTYIWLLQRFVEAMNGKRPNAVITDGAKAMKLAIEKVFPDAHHRLCGWHLLRNATANVSNPKFTQQFRKCMLGDYEIDEFEERWVSMVNSFGVKDMEWVETTYGIKDMWATAHMRGKFFAGLRTTSRCEALHSQVARFVKSGYSIKEFLHHFRRWMGLLRNNEAEADYYTSYGYPIMQTQVQALERSGASVYTREVFYLFRSLLLKASSVIIVDWRETSCSVNYDVRKYCELTRKWVVSYWPGSSEFRCSCQRMESFGIPCVHIIRLLIYLQITELPESLILKRWTMKAKEAHIRLEQQGSLVGDRSYESRIAAMNDELEGLPFAACGDLGDFKDVMEWVRNKKAELFAKHEKNREGSSKSAGEKFKTRTDAISKEAGDKKKKRRIRCSRCNGIGHNRRNCRRGDDHNQMESGDGGGPEDDDDWSSQTSEEGIEEMDFDVTIGNQKGKYR* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0581 772 Pfam MULE transposase domain 281 375 IPR018289 -
Ahy20g0581 772 PANTHER OS02G0262500 PROTEIN 61 706 - -
Ahy20g0581 772 Pfam FAR1 DNA-binding domain 71 162 IPR004330 -
Ahy20g0581 772 MobiDBLite consensus disorder prediction 673 701 - -
Ahy20g0581 772 MobiDBLite consensus disorder prediction 719 772 - -
Ahy20g0581 772 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 706 IPR031052 GO:0006355
Ahy20g0581 772 MobiDBLite consensus disorder prediction 673 703 - -
Ahy20g0581 772 MobiDBLite consensus disorder prediction 720 736 - -
Ahy20g0581 772 MobiDBLite consensus disorder prediction 737 759 - -
Ahy20g0581 772 Pfam SWIM zinc finger 570 593 IPR007527 GO:0008270
Ahy20g0581 772 ProSiteProfiles Zinc finger SWIM-type profile. 558 594 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0581 Ahy-Chr20 6171434 6178966 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy20g0581 MULE 2.70E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0581 - - adu:107465206 1489.94