Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0575 ATGCCTTTTACAGCATGGAAAAGTCATTGGTACAAGTTAACTACTAGTAACACGTTTTCAGAGGCAGCAATAATTTCCTTTTTCAATATTGTAACCTCTGTGGATACCTTAACTGCAACACAGTCACTTGGGATCAACCAAACACTTGTATCCTCAAAGCAGGTGTTTGAGTTCGGCTTCTTCAATGGAACCAACAACTCCACATGGTACTTAGGAATATGGTACAAGGACATTCCTCAAAGAACAGTGGTTTGGGTTGCAAACCGAGACACCCCACTTAAGGATACCAATGGAACTCTCAAGATTGGAGCAAGGGGGAACCTTGTTCTTCTTGATCATGCAGGAAATGCTATTTGGTCCTCAAATGAAACCACTGCTACAAATCCAGTTCTTCAGCTTTTGGATACAGGAAACTTGATTCTCAGAGAAGCAAACAAAAATGGTGCAATTGATGGCAACTATCTATGGCAGAGCTTTGATTATCCAACAGATACTTTGTTACCGGGAATGAAGCTTGGTTGGAACTTGGACACTGGTATTGAGCTCTATATAACATCATGGAAGAGCCAAGATGACCCCTCAAGTGGTGATTTTTCTTTTAGGATGGAAAAACTTGGGCTACCAGAAATTTTTTTATGGAATAATCAAGTTAAGGTACATAGAAGTGGACCATGGAATGGAGTGAGATTCAGTGAAATACCAGTGGTTTCATCAAATGCTGTTCTTCAAGATAATATGTCTGTGGATTCACATGAAGTGTACTACATACTTTCAGCTATCAATCAGTCCAAGTTTTCAAGAAAAACTGTGAGCTGGAATGGCGAAATTCAACGTCTTGTGTGGGTGGAAAGTAGCCAAAGCTGGAAGAAGCTATGGTTTGCACCAAGTGGTGAATGTGACAAGTATGGTATCTGTGGTCCATATGGTATCTGTGACTCCAATGCTTTCCCAGTATGCAGTTGTATTCAAGGCTTCAGTGTCAAGAACCAGACAGAGTGGGATTTCAGGGATTTTTCTAATGGTTGTGTAAGAAAGACAAGATTGGATTGTGGGAGAGACAAGTTTCTGAAGCTGCAACATGTGGAACCACCAGAAACAACAAGAGTGTTTGTGAACAGAAGCATGACTCTTCAAGAATGTGAAGCTATGTGCTTGAAAAATTGCTCTTGCACTGCCTATGCTAATGTTGAGATCACAGATGGAGGAACTGGTTGTGTGATGTGGAGTGATGAACTCTTAGACACGAGGATGTTTTCTGTTGCTGGCCAAGATCTCTTTATCAGATTAGCATCTTCTGATGTAGTTGACATAAACAATGGATCTGGTGGTAGCTCAGGAAAGAACAATAATGTAGGCAAAATAGTAGGCATTACATTTGGTGCTGTTGCTAGTGTAATTTTGGGCTTGAGCTTGTTTCTTTTATGGAAGAAGAGAAAATTGAAAAGTATATGGCAAAGGAAAACCAATCAGAAAGGTTCCTATGAGAGACCTCAGCGCATTGAGAGAGTAATTTCAGCTAGCAGAGAACTCTCAGGTGAACGCACCATGGATGACTTAGAGTTGCCATTGTTTGATTTCACAACACTAACAATGGCCACTAACAACTTCTCTGAAGGAAATAAGCTCGGAGAAGGTGGTTTTGGAAGTGTTTACAGGGGTAGGTTGGTTGAAGGACTAGAGATTGCTGTGAAAAGGTTGTCCAAAAGCTCTGGCCAAGGAAATGAAGAATTCAAGAATGAGGTCAAGTCAATGGCAAAGCTTCAACACAGAAATCTTGTAAGATTGTTTGGTTGCTGCATTGAAAAGGAGGAGCAGATGTTGGTTTATGAATACATGGAAAACAACAGCCTTGAATCTATTTTATTTGACAAAGACAAATGTTGTTTGCTTGACTGGCAAATGCGATTCGATATTATATGTGGAATATCTAGAGGACTTCTTTATCTTCACCAAGACTCCAGACTTAGAATTATCCACAGGGATCTCAAGGCAAGTAATATTCTGCTGGATAGAGAAATGAACCCAAAGATATCGGATTTTGGAATGGCTAGAATTTTCTGCAGCGATCAAACTCAAGCAAACACAAGGAGAGTTGTTGGAACATATGGCTATATGTCGCCAGAATATGCAATGGACGGACTCTTCTCAGTTAAGTCTGATGTTTTCAGTTTTGGCGTTCTTGTGCTAGAGATCATAAGCGGCAAAAAGAACAAAGGATTTTATTCCTCAGAAGAGATAAATCTTCTGGGACATGCATGGAGGTTATGGAAAGAAGGGAGGGCATTAGAACTGATAGATTCATCATTTGGTGATTCCTATTCAGAAACAGAAGTACTGAGATGCATACAAGTTGGGCTGATATGTGTGCAAGAAAGAGCAGAAGATAGACCAACAATATCTTCTGTGGTGTTGATGTTAAGTAGCGAAAATGCATCAATGCCACAGCCTAGAAACCCCGGGTTTGTCCTTGGAAAGAGTCCTGCTGAAACTGTTTCTTCTTCAGCTAATGAAGAAGAATACTCAGTGAACCAAGTCACAATAACAGTAGTAGATGGCAGGTAG 2562 0.404 MPFTAWKSHWYKLTTSNTFSEAAIISFFNIVTSVDTLTATQSLGINQTLVSSKQVFEFGFFNGTNNSTWYLGIWYKDIPQRTVVWVANRDTPLKDTNGTLKIGARGNLVLLDHAGNAIWSSNETTATNPVLQLLDTGNLILREANKNGAIDGNYLWQSFDYPTDTLLPGMKLGWNLDTGIELYITSWKSQDDPSSGDFSFRMEKLGLPEIFLWNNQVKVHRSGPWNGVRFSEIPVVSSNAVLQDNMSVDSHEVYYILSAINQSKFSRKTVSWNGEIQRLVWVESSQSWKKLWFAPSGECDKYGICGPYGICDSNAFPVCSCIQGFSVKNQTEWDFRDFSNGCVRKTRLDCGRDKFLKLQHVEPPETTRVFVNRSMTLQECEAMCLKNCSCTAYANVEITDGGTGCVMWSDELLDTRMFSVAGQDLFIRLASSDVVDINNGSGGSSGKNNNVGKIVGITFGAVASVILGLSLFLLWKKRKLKSIWQRKTNQKGSYERPQRIERVISASRELSGERTMDDLELPLFDFTTLTMATNNFSEGNKLGEGGFGSVYRGRLVEGLEIAVKRLSKSSGQGNEEFKNEVKSMAKLQHRNLVRLFGCCIEKEEQMLVYEYMENNSLESILFDKDKCCLLDWQMRFDIICGISRGLLYLHQDSRLRIIHRDLKASNILLDREMNPKISDFGMARIFCSDQTQANTRRVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEIISGKKNKGFYSSEEINLLGHAWRLWKEGRALELIDSSFGDSYSETEVLRCIQVGLICVQERAEDRPTISSVVLMLSSENASMPQPRNPGFVLGKSPAETVSSSANEEEYSVNQVTITVVDGR* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0575 853 Pfam Protein tyrosine and serine/threonine kinase 539 803 IPR001245 GO:0004672|GO:0006468
Ahy20g0575 853 ProSiteProfiles Protein kinase domain profile. 536 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0575 853 PIRSF SRK 8 853 IPR024171 GO:0004674
Ahy20g0575 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Ahy20g0575 853 Gene3D Phosphorylase Kinase; domain 1 512 611 - -
Ahy20g0575 853 Pfam D-mannose binding lectin 82 188 IPR001480 -
Ahy20g0575 853 SMART blect_4 40 162 IPR001480 -
Ahy20g0575 853 SUPERFAMILY Protein kinase-like (PK-like) 521 838 IPR011009 -
Ahy20g0575 853 Pfam S-locus glycoprotein domain 221 328 IPR000858 GO:0048544
Ahy20g0575 853 Pfam PAN-like domain 350 415 IPR003609 -
Ahy20g0575 853 SMART ntp_6 350 429 IPR003609 -
Ahy20g0575 853 PANTHER - 24 852 - -
Ahy20g0575 853 CDD PAN_AP_plant 346 430 - -
Ahy20g0575 853 Gene3D - 29 159 IPR036426 -
Ahy20g0575 853 CDD B_lectin 40 162 IPR001480 -
Ahy20g0575 853 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 193 IPR036426 -
Ahy20g0575 853 ProSitePatterns Protein kinases ATP-binding region signature. 542 564 IPR017441 GO:0005524
Ahy20g0575 853 SMART serkin_6 536 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0575 853 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 852 - -
Ahy20g0575 853 Pfam Domain of unknown function (DUF3403) 808 853 IPR021820 GO:0004674
Ahy20g0575 853 Gene3D Transferase(Phosphotransferase) domain 1 612 817 - -
Ahy20g0575 853 ProSiteProfiles PAN/Apple domain profile. 350 430 IPR003609 -
Ahy20g0575 853 ProSiteProfiles Bulb-type lectin domain profile. 34 154 IPR001480 -
Ahy20g0575 853 CDD STKc_IRAK 542 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0575 Ahy-Chr20 6078643 6082257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0575 438 841 Receptor kinase-like Gene Family AT4G23190 51.589 4.87e-135 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g0575 PK_Tyr_Ser-Thr 1.80E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0575 - - aip:107621503 1667.13