Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0573 ATGAGAATCTTCTTCAACCACCTTAACTACCTCATCATCATTCTTATTAGCCTCTTCTTCATCACTCCACCAGCCTCTACCGACACTTTAACGGGAAAACAAATCCTCAGAACTAACCAAACGCTATTGTCACAAAACCAAACCTTCGTGCTGGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAATCCTCAAACAATTGTTTGGGTTGCAAACAGAGACAACCCCATTGACAACTCTACAGGCTATCTCAAGATCGGAGACAACGGAAACTTTGTTCTTCTCAATTCATCCGGGAACCTCGCATGGTCCTCCAACCAAACCAACGCAAGGAATCCAGTTCTTCAGCTCCTCGATACAGGTAACCTTGTTCTCAAGGATTCATCAGACAATACCAATAGTAACTACTTATGGCAGAGCTTCGATTATCCAACCGATACCATGTTACCGGGGATGAAGCTTGGTTGGAACTTGGACACAAGAACAGAGAAGCACTTAACATCATGGAAGGTCGCAGGTGAAGACCCTTCAAGCGGTGACTACACTTTAAAGATAGATTACCATGGTTTACCAGATATTTTCATCAGGAGAAACCAAACTATAATATTCCGAACTGGTGATTGGAATGGTGAGAGATTCACTGGGGTCCCAGGGATGGGAGACAACATAAATGAAATCAAGTACAATTTCACTTATGATGAGCATGGTGTGTGGTACTCTTACTCCGTTACAATAGCTTCCTTGTTGTCGAGGTTAATCCTGACATCTGATTCTGATGGCCAGTATCAACGCTACATGTGGATACAAGGAACATGGAGCAAGTTCTCGTACGTACCAGCGTATCAATGCGATTACTACAGAGTGTGTGGTTCGTATGGAGTGTGTGACAATGATGCTTCGCCGATTTGCACTTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACGGGTTTGAATTGTTCCACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACAACAAGTGTGTTTGTGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGCAAGAGGAATTGTTCATGCACTGCATATGCAAACATCTACATCACAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGTCAACTCTTTGACATGGTTGTCTTCCCTAAGAATGGCCAAGATCTCTATGTCAGATTGGCCGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGTAGTTCTGGCTATTGGCATCACACTTAGTGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACTTAAGGAAGAAGAGCAAACAAAAATCAAGAGGTTTTGTCCACAGAAGTCATGATTTCTTAATGAATGAGGTGGTGCCTTCTGTTGAAAGGAACATGGATGATTTAGAGTTGCCAATGTTTGATTTTGATACTCTAACAATTGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTCATAAGGGTAGATTGGTTGATGGTCAAGAAATTGCTATAAAAAGATTATCAAAAGACTCTGGACAAGGAATAGAAGAGTTTAAGAATGAAGTCAAGTTAATTGTCAAACTACAACACCGAAATCTCGTTCGGTTGCTTGGTTGCTGCATTGAGAAGGATGAGAAGATATTGGTTTATGAGTATATGGAAAATAGAGGCCTGGATTCCGTTTTGTTTGACAAATCAAAAGGACCTTTGCTTGATTGGAAAAAACGTTTCAATATTATATATGGTATAGCTAAAGGGCTTCTATATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTTAAGACAAGTAACATATTACTAGATAATGAAATGAATCCAAAGATATCAGACTTTGGAATGGCTAGAATTTTTGACGAAGATCAAATGCAAGCAAAAACACGAAGAATTGTTGGAACATATGGTTACATGTCTCCAGAATATGCTATGGACGGAAATTTTTCGGTAAAAACTGATGTTTTTAGTTTTGGAGTTCTAGTATTGGAGATCATAACAGGAAAGAAGAATAGAGGGTTCTACATTGATGACGATGAATTGAATCTTTTAGGAAATGTATGGAGGCATTGGCATGAAGGAACTGTATTGACATTGATTGATCCATCCATTGGCAATTCATACATAGAGTCTGATGTTATAAGATGCATACATATTGGACTTTTATGTGTTCAAGAACATGCAGAAGATAGACCAACAATGTCTTCAGTGATCTTAATGTTAAATAATGAAGTTCCATCATTGTCATATCCTAAAAATCCTGGATTTTTCGCAAGAAAAAATCATCCAGAGACTGATTCATCTTCAAATAAACAAGATGAAATATGGAGTGTGAATCAAGTCACAACGACAATGTTAGAAGCTAGATAA 2493 0.3923 MRIFFNHLNYLIIILISLFFITPPASTDTLTGKQILRTNQTLLSQNQTFVLGFFRGSNTNYYLGIWYNNINPQTIVWVANRDNPIDNSTGYLKIGDNGNFVLLNSSGNLAWSSNQTNARNPVLQLLDTGNLVLKDSSDNTNSNYLWQSFDYPTDTMLPGMKLGWNLDTRTEKHLTSWKVAGEDPSSGDYTLKIDYHGLPDIFIRRNQTIIFRTGDWNGERFTGVPGMGDNINEIKYNFTYDEHGVWYSYSVTIASLLSRLILTSDSDGQYQRYMWIQGTWSKFSYVPAYQCDYYRVCGSYGVCDNDASPICTCMQGFRPKNQEAWNLRDGSDGCVRNTGLNCSTDKFLHLENMKLPETTSVFVNKSMTLDECGSLCKRNCSCTAYANIYITNGGSGCVMWLGQLFDMVVFPKNGQDLYVRLAAADIGSTSSNKNHRVVLAIGITLSALVLVLGLVAICYLRKKSKQKSRGFVHRSHDFLMNEVVPSVERNMDDLELPMFDFDTLTIATNNFSQDNKLGEGGFGSVHKGRLVDGQEIAIKRLSKDSGQGIEEFKNEVKLIVKLQHRNLVRLLGCCIEKDEKILVYEYMENRGLDSVLFDKSKGPLLDWKKRFNIIYGIAKGLLYLHQDSRFRIIHRDLKTSNILLDNEMNPKISDFGMARIFDEDQMQAKTRRIVGTYGYMSPEYAMDGNFSVKTDVFSFGVLVLEIITGKKNRGFYIDDDELNLLGNVWRHWHEGTVLTLIDPSIGNSYIESDVIRCIHIGLLCVQEHAEDRPTMSSVILMLNNEVPSLSYPKNPGFFARKNHPETDSSSNKQDEIWSVNQVTTTMLEAR* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0573 830 Pfam D-mannose binding lectin 74 178 IPR001480 -
Ahy20g0573 830 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 829 - -
Ahy20g0573 830 SMART blect_4 33 152 IPR001480 -
Ahy20g0573 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Ahy20g0573 830 Pfam Domain of unknown function (DUF3403) 789 830 IPR021820 GO:0004674
Ahy20g0573 830 ProSiteProfiles Protein kinase domain profile. 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0573 830 Gene3D - 23 149 IPR036426 -
Ahy20g0573 830 SUPERFAMILY Protein kinase-like (PK-like) 496 811 IPR011009 -
Ahy20g0573 830 CDD STKc_IRAK 517 784 - -
Ahy20g0573 830 Pfam PAN-like domain 342 407 IPR003609 -
Ahy20g0573 830 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Ahy20g0573 830 ProSiteProfiles PAN/Apple domain profile. 342 422 IPR003609 -
Ahy20g0573 830 PIRSF SRK 1 830 IPR024171 GO:0004674
Ahy20g0573 830 Gene3D Transferase(Phosphotransferase) domain 1 587 790 - -
Ahy20g0573 830 SMART serkin_6 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0573 830 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Ahy20g0573 830 SMART ntp_6 342 421 IPR003609 -
Ahy20g0573 830 PANTHER - 12 829 - -
Ahy20g0573 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 217 IPR036426 -
Ahy20g0573 830 Gene3D Phosphorylase Kinase; domain 1 486 586 - -
Ahy20g0573 830 CDD B_lectin 34 152 IPR001480 -
Ahy20g0573 830 Pfam Protein tyrosine and serine/threonine kinase 513 779 IPR001245 GO:0004672|GO:0006468
Ahy20g0573 830 CDD PAN_AP_plant 340 422 - -
Ahy20g0573 830 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0573 Ahy-Chr20 6047464 6050919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0573 499 830 Receptor kinase-like Gene Family AT4G11530 57.864 1.24e-129 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g0573 PK_Tyr_Ser-Thr 6.30E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0573 - - aip:107621495 1319.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0573 20 6047464 6050919 Ahy10g0375 10 3470237 3475052 hybridization
Ahy3g2973 3 126347703 126351685 Ahy20g0573 20 6047464 6050919 PCT