Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0570 ATGAGAATCTTCATCACTCCCCTTAACTACCTCATCATCATTGTTATTAGCTTCTTCTTCTTCTTCATCATTCCATCAACCTCTTCGGATACTTTAACCGGAACACAAAACCTCACAACCAACCAAACGCTATTATCACAAAACCAATCCTTCGTGCTGGGCTTCTTCAGAGGTTCCAACACCAACTATTATCTCGGAATATGGTACAACAACATCATTCCTCAAACAATAATTTGGGTTGCAAACAGAGACAACCCCATTGACAACTCTACAGGCTATCTCAAGATTGGAGAAAACGGAAACTTTGTCCTCCTCAATTCATCCGGCAACCCCGCATGGTCCTCCAACCAAACCAGCGCCAAGAATCCAGTTCTCCAGCTCCTCGATACCGGTAACCTTGTTCTCAAAGATTCAGAACAGAGCAATAACTACCTATGGCAGAGCTTCGATTACCCAACAGATACCTTGTTAGCTGGGATGAAGTTGGGTTGGGACTTAGACACAGGAATTGAGAAGTACTTAACATCGTGGAAGGTCACAGGTGTTGACCCTTCTTCCGGTCACTACACTTACAAGCTAGATTACCGCGGTTTACCTGAGATTTTTCTGAGGAGAAACCAGACTATCATATACCGAACTGGTCCTTGGAATGGTGAGAGATTCAGCGGGGTTCCAAAGATGAACACCGATACTGATTCCATTGTGTTCAGCTTCTCCGATGACGCGCACGGCGTGTTCTACTCTTTCTCCATCGGGAACGCTTCTTTGTTATCGAGGCTAACGATGACGTCAGATTCAGGCGGAGAACTTCAACGGTGGACGTGGACAGAGAGCAGCGAATCTTGGAACGAGTTCTGGTACGCACCGGCGGATCAATGCGACCATTACAGGGAGTGTGGTCCGTACGGAGTGTGTGACAATAATGCATCGCCGGTTTGCACATGTATGAAAGGGTTCAGCCCTAAGAACCCTCAGGCTTGGAATCTGAGAGATGGATCTGGCGGGTGTGTGAGGAACACGGGTTTGAATTGTTCGACTGACAAGTTCTTACATCTTGAGAACATGAAGCTGCCGGAGACAAGCAGCGTGTTTATAAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGATATTAGAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGTCAACTCATTGACATTAGAGTCTACGCTACCTATGGCCAAGATCTCTTCGTCAGATTGGCAGCTGCTGATATAGGATCTACTAGCTCCAGCAAGAGTCGTAGAGCAGTTCTGGCTATTGGCATCACACTTAGTGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACTTAAGGAAGAAGAGACAACAAAGATCTAGAGCCGCTATTCCAGGTTTTGTCCACAGAAGTCCTGATAGTTTGATGAATGAGGTGGTTTCTTCTAGAGGATACTTAGGTGATGAAAGCAACATGGATGATATAGAGCTGCCATTGTTTGATTGTGATACCTTAACAATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATATGGGTAGATTGATTGAAGGTCGAAAAATTGCTGTGAAGAGATTATCAAAAAATTCTGGACAAGGAATTGAGGAGTTTAAGAATGAAGCCAAGCTAATTGTCAAACTCCAACATCGAAATCTTGTTCGATTGCTTGGTTGCTGTATTGAAAATGATGAAAAGATGTTGGTGTATGAGTATATGGAAAATAGAGGCCTTGATTCCATTTTGTTTGACAACTCAGAAAGTAGAGTTTTGCTTGACTGGGAAAGGCGTTTTAATATTATATATGGAATAGCTAGAGGACTTCTTTATTTGCACCAAGATTCAAGATTTCGAATTATTCACAGAGATCTTAAGATAAGTAACATATTACTAGATAGTGAAATGATTCCTAAGATATCAGATTTTGGAATGGCAAGAATATTTGACAAAGATCAAACACAAGCAAAAACATTAAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGCACGGAAACTTTTCAGTAAAATCTGATGTTTTTAGTTTTGGTGTTATGGTATTGGAGATCATAACTGGAAAGAAGAATAGAGAGTTTTACAGTGATAACAATGAATTGAATCTTCTGGGAAATGTATGGAAACATTGGCATGAAGGAACCGCATTGACACTTCTTGATCCATCAATCTGCAATTCATACACAGAAGCTGAAGTTGTAAGATGCATACATATTGGGCTCTTATGTGTCCAAGAACATGCAGAAGATAGACCAACAATGTCTTCAGTGATCTTAATGTTAAGTAGTGAAACTTCATCTTTGCCAAATCCTAAAACTCCTGGATTTTCCATAAAGAAAATTCATCCAAAGACCGAGTCATCTTCAAGTAGTGTAAATCAAGTTACCGTCACAATGTTAGATGCTAGGTAG 2511 0.4102 MRIFITPLNYLIIIVISFFFFFIIPSTSSDTLTGTQNLTTNQTLLSQNQSFVLGFFRGSNTNYYLGIWYNNIIPQTIIWVANRDNPIDNSTGYLKIGENGNFVLLNSSGNPAWSSNQTSAKNPVLQLLDTGNLVLKDSEQSNNYLWQSFDYPTDTLLAGMKLGWDLDTGIEKYLTSWKVTGVDPSSGHYTYKLDYRGLPEIFLRRNQTIIYRTGPWNGERFSGVPKMNTDTDSIVFSFSDDAHGVFYSFSIGNASLLSRLTMTSDSGGELQRWTWTESSESWNEFWYAPADQCDHYRECGPYGVCDNNASPVCTCMKGFSPKNPQAWNLRDGSGGCVRNTGLNCSTDKFLHLENMKLPETSSVFINKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLGQLIDIRVYATYGQDLFVRLAAADIGSTSSSKSRRAVLAIGITLSALVLVLGLVAICYLRKKRQQRSRAAIPGFVHRSPDSLMNEVVSSRGYLGDESNMDDIELPLFDCDTLTMATNNFSQDNKLGEGGFGSVYMGRLIEGRKIAVKRLSKNSGQGIEEFKNEAKLIVKLQHRNLVRLLGCCIENDEKMLVYEYMENRGLDSILFDNSESRVLLDWERRFNIIYGIARGLLYLHQDSRFRIIHRDLKISNILLDSEMIPKISDFGMARIFDKDQTQAKTLRVVGTYGYMSPEYAMHGNFSVKSDVFSFGVMVLEIITGKKNREFYSDNNELNLLGNVWKHWHEGTALTLLDPSICNSYTEAEVVRCIHIGLLCVQEHAEDRPTMSSVILMLSSETSSLPNPKTPGFSIKKIHPKTESSSSSVNQVTVTMLDAR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0570 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 218 IPR036426 -
Ahy20g0570 836 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 835 - -
Ahy20g0570 836 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Ahy20g0570 836 PIRSF SRK 2 836 IPR024171 GO:0004674
Ahy20g0570 836 Pfam S-locus glycoprotein domain 211 323 IPR000858 GO:0048544
Ahy20g0570 836 Gene3D Hepatocyte Growth Factor 342 419 - -
Ahy20g0570 836 Pfam Protein tyrosine and serine/threonine kinase 524 791 IPR001245 GO:0004672|GO:0006468
Ahy20g0570 836 PANTHER - 17 835 - -
Ahy20g0570 836 Pfam Receptor serine/threonine kinase 479 510 IPR022126 GO:0004674
Ahy20g0570 836 ProSiteProfiles EGF-like domain profile. 289 325 IPR000742 -
Ahy20g0570 836 Pfam Domain of unknown function (DUF3403) 796 836 IPR021820 GO:0004674
Ahy20g0570 836 Gene3D Phosphorylase Kinase; domain 1 497 597 - -
Ahy20g0570 836 SMART serkin_6 522 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0570 836 SMART ntp_6 344 423 IPR003609 -
Ahy20g0570 836 ProSiteProfiles PAN/Apple domain profile. 344 424 IPR003609 -
Ahy20g0570 836 CDD PAN_AP_plant 342 424 - -
Ahy20g0570 836 Gene3D Transferase(Phosphotransferase) domain 1 598 805 - -
Ahy20g0570 836 ProSiteProfiles Protein kinase domain profile. 522 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0570 836 CDD STKc_IRAK 528 794 - -
Ahy20g0570 836 SUPERFAMILY Protein kinase-like (PK-like) 506 794 IPR011009 -
Ahy20g0570 836 Gene3D - 24 149 IPR036426 -
Ahy20g0570 836 CDD B_lectin 38 152 IPR001480 -
Ahy20g0570 836 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Ahy20g0570 836 SMART blect_4 35 152 IPR001480 -
Ahy20g0570 836 Pfam PAN-like domain 344 409 IPR003609 -
Ahy20g0570 836 Pfam D-mannose binding lectin 76 178 IPR001480 -
Ahy20g0570 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0570 Ahy-Chr20 5993929 5997183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0570 440 823 Receptor kinase-like Gene Family AT4G05200 51.804 4.68e-128 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g0570 PK_Tyr_Ser-Thr 8.30E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0570 - - aip:107621495 1270.76