Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0568 ATGAGAGTCTTCTTCACTCACCTTAACTACCTCTTCATCTTTGTTATTAGCTTCTTCTTCATCACTCCATCAACCGCTTCTGATACTTTAACCGGCACACAAATCCTCACAACAAACCAAACGCTATTATCACAAAACCGATCCTTCGTGCTGGGCTTCTTCAGAGATTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAGTCCTCAAACAATAGTTTGGACTGCAAACAGAGACAACCCCATCGACAATAGTTCAGGCTATCTCAAGATCGGAGACAACGGAAGCTTTGTCCTCCTCAATTCATCCGGTAGCCCCGCATGGTCCTCCAATCAAACCAACTCCAAGAATCCAGTTCTCCAGCTCCTCGATACAGGTAACCTTGTTCTCAAGGATTCATCAGACAAGACCAATAATAACTACTTATGGCAGAGCTTCGATTACCCAACGGATACCTTGTTACCGGGGATGAAGGTCGGTTGGAACCTGAATACAGGAACGGAGAAGTACTTAACATCATGGAAGGTCGAAGGTGAAGACCCTTCAAGCGGTGACTACACTTTGAAGATAGATTACCATGGTTTACCTGAGGGCTTCCTCAGGAGAAACCAAACTATAACATACCGAACTGGTCCTTGGAATGGTGAGAGATTCAGTGGGATCCCAGGGATGAAAGACGACACCAATGATCTCAGGTACAATTTCTCTTATGATGAGCATGGGGTGTGGTTCTCTTTCTCCGTTACAGAACCTTCCTTGTTGTCGAGGATAATTCTGTCACCTGATTCTGATGGCCAGTATCAACGCTACATGTGGATACAAGGAAGATGGAACAAGTTCTCCTACGCACCAAAGGATCAATGCGATTACTATGGAGTGTGTGGTTCGTATGGAGTTTGTGACAGTAATGCTTCGCCGGTATGCTCTTGTATTCAGGGGTTCAGACCAAAGAACCAGGAAGCTTGGAACTTGAGAGATGGATCTGATGGGTGTGTGAGGAACACGGGTTTGAATTGTTCGACTGACAAGTTCTTGCAACTTGAGCACATGAAGCTGCCGGATACAACGAACGTGTTTGTGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGCAAGAGGAATTGTTCATGCACTGCATATGCAAACATTGATATCAGAAATGGAGGAAGTGGCTGTGTTATGTGGGTTGGCCAACTCTTTGACATGAATGTCCACCGTACAGACGGTCAAGATCTCTATGTCAGATTGGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGCGGTTCTGGCTATTGGCATCACACTTTGTGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACTTAAGGAAGAAGAGACAACAAAGTTCTAGAGCCGCTATTCCAGGTTTTGTCCACAGAAGTCATGATAGTTTGATGAATGAGGTGGTGTCTTCTAGAGGATACTTAGGTGATGAAAGGAACATGGATGATATAGAGCTGCCATTGTTTGATTGTGATACCTTAACAATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATATGGGTAGATTGATTGAAGGTCAAAAAATTGCTGTGAAGAGATTATCAAAATATTCTGGACAAGGAATTGAGGAGTTTAAGAATGAAGTCAAGCTAATTGCCAAACTCCAACATCGAAATCTTGTTCGATTGCTTGGTTGCTGTATTGAAAATGATGAAAAGATGTTGGTGTATGAGTATATGGAAAATAGAGGCCTTGATTCCATTTTGTTTGACAAATCAGAAAGTAGATTTTTGCTTGACTGGGAAAGGCGTTTTAATATCATATATGGAATAGCAAGAGGACTTCTTTATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTTAAGATAAGTAACATATTACTAGATAGTGAAATGATTCCCAAGATATCAGATTTTGGAATGGCAAGAATATTTGACAAAGATCAAACACAAGCAAAAACATTAAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGATGGAAACTTTTCAGTAAAATCTGATGTTTTTAGTTTTGGTGTTATGGTATTGGAGATCATAACTGGAAAGAAGAACAGAGAGTTTTACAGTGATAACAATGAATTGAATCTTCTGGGAAATGTATGGAGACATTGGCATGAAGGAACTGCATTGACACTTCTTGACCCATCAATCTGCAATTCATACACAGAAGCTGAAGTTGTAAGATGCATACATATTGGGCTCTTATGTGTCCAAGAACATGCAGAAGATAGACCAACAATGTCTTCAGTGATCTTAATGTTAAGTAGTGAAACTCCATCTTTGCCAAATCCTAAAACTCCTGGATTTTCCATAAAGAAAAATCATCCAAACACTGAGTCATCTTCAAGTAAGAATGATGAAACATGGAGCGTAAATCAAGTTACAGTCACAACGTTAGATGCTAGGTAG 2523 0.4031 MRVFFTHLNYLFIFVISFFFITPSTASDTLTGTQILTTNQTLLSQNRSFVLGFFRDSNTNYYLGIWYNNISPQTIVWTANRDNPIDNSSGYLKIGDNGSFVLLNSSGSPAWSSNQTNSKNPVLQLLDTGNLVLKDSSDKTNNNYLWQSFDYPTDTLLPGMKVGWNLNTGTEKYLTSWKVEGEDPSSGDYTLKIDYHGLPEGFLRRNQTITYRTGPWNGERFSGIPGMKDDTNDLRYNFSYDEHGVWFSFSVTEPSLLSRIILSPDSDGQYQRYMWIQGRWNKFSYAPKDQCDYYGVCGSYGVCDSNASPVCSCIQGFRPKNQEAWNLRDGSDGCVRNTGLNCSTDKFLQLEHMKLPDTTNVFVNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWVGQLFDMNVHRTDGQDLYVRLAAADIGSTSSNKNHRAVLAIGITLCALVLVLGLVAICYLRKKRQQSSRAAIPGFVHRSHDSLMNEVVSSRGYLGDERNMDDIELPLFDCDTLTMATNNFSQDNKLGEGGFGSVYMGRLIEGQKIAVKRLSKYSGQGIEEFKNEVKLIAKLQHRNLVRLLGCCIENDEKMLVYEYMENRGLDSILFDKSESRFLLDWERRFNIIYGIARGLLYLHQDSRFRIIHRDLKISNILLDSEMIPKISDFGMARIFDKDQTQAKTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVMVLEIITGKKNREFYSDNNELNLLGNVWRHWHEGTALTLLDPSICNSYTEAEVVRCIHIGLLCVQEHAEDRPTMSSVILMLSSETPSLPNPKTPGFSIKKNHPNTESSSSKNDETWSVNQVTVTTLDAR* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0568 840 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 839 - -
Ahy20g0568 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 178 IPR036426 -
Ahy20g0568 840 SMART blect_4 33 152 IPR001480 -
Ahy20g0568 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Ahy20g0568 840 Gene3D Transferase(Phosphotransferase) domain 1 596 800 - -
Ahy20g0568 840 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Ahy20g0568 840 PIRSF SRK 1 840 IPR024171 GO:0004674
Ahy20g0568 840 SMART ntp_6 342 421 IPR003609 -
Ahy20g0568 840 ProSiteProfiles PAN/Apple domain profile. 342 422 IPR003609 -
Ahy20g0568 840 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Ahy20g0568 840 Pfam Receptor serine/threonine kinase 477 508 IPR022126 GO:0004674
Ahy20g0568 840 SUPERFAMILY Protein kinase-like (PK-like) 504 792 IPR011009 -
Ahy20g0568 840 Pfam D-mannose binding lectin 74 178 IPR001480 -
Ahy20g0568 840 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Ahy20g0568 840 ProSiteProfiles Protein kinase domain profile. 520 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0568 840 SMART serkin_6 520 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0568 840 PANTHER - 12 839 - -
Ahy20g0568 840 Pfam Domain of unknown function (DUF3403) 794 840 IPR021820 GO:0004674
Ahy20g0568 840 Gene3D Hepatocyte Growth Factor 340 422 - -
Ahy20g0568 840 Gene3D - 22 149 IPR036426 -
Ahy20g0568 840 Pfam PAN-like domain 342 407 IPR003609 -
Ahy20g0568 840 Pfam Protein tyrosine and serine/threonine kinase 522 789 IPR001245 GO:0004672|GO:0006468
Ahy20g0568 840 CDD STKc_IRAK 526 792 - -
Ahy20g0568 840 Gene3D Phosphorylase Kinase; domain 1 495 595 - -
Ahy20g0568 840 CDD B_lectin 33 152 IPR001480 -
Ahy20g0568 840 CDD PAN_AP_plant 340 422 - -
Ahy20g0568 840 MobiDBLite consensus disorder prediction 797 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0568 Ahy-Chr20 5978261 5981743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0568 438 839 Receptor kinase-like Gene Family AT4G05200 49.752 1.15e-125 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g0568 PK_Tyr_Ser-Thr 1.20E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0568 - - aip:107621495 1349.34