Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0567 ATGAGAATCTTCTTCACTCATCTTATTGACTACATCATCATTGTTATTGGTTTCTTCTTCATCACTCCATCAACCTCTTTCGATACTTTAACCGGAACACAAATCCTCAGAACCAACCAAACGCTATTGTCACAAAACCAATCCTTCGTGCTGGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAATCCTCAAACAATAGTTTGGGTTGCAAACAGGGACAACCCTATTGAAACCTCCACAGGCTATCTCAAGATTGGAGACAATGGAAACTTTGTCCTCCTCAATTCATCCGGGAACCCTGCATGGTCCTCCAACCAAACCCACGCCAAGAATCCAGTTCTCCAGCTCCTTGATACCGGTAACCTTGTTCTCAAAGATTCATCAGACAAGACCAATAATAACTACTTATGGCAGAGCTTCGAGTACCCAACGGATACCTTGTTACCAGGGATGAAGGTCGGTTGGAACTTGGACACAGGAACAGAGAAGCACTTAACATCATGGAAGGTCACAGGTGAAGACCCTTCAAGCGGGGACTACACTTTGAAGATAGATTACCATGGTTTATATGAGACTCTCCTCAGGAGAAACCAAACTATAATATGCCGAAGTGGTCCTTGGAATGGTGAGAGATTCAGTGGGAACCCGGCGATGAAAGACAACACCGATGGTCTCAAGTTCAATTTCACTTATGATGATCATGGTGCGTGGTACTCTTTTTCCGTTACAAGACCTTCCTTGTCGAGGATAATTGTGACATCTGATTCTGATGGCGAGTTTCAACGCTACCTGTGGATACAAGGAAGATGGAACAAGTTCTGGTACAAACCGTCGGATCAATGCGACCATTACAGGGAGTGTGGTCCGTACGGAGTGTGTGACAATAATGCATCGCCGGTTTGCACATGTATGAAAGGGTTCAGCCCTAAGAACCCTCAGGCTTGGAATCTGAGAGATGGATCTGATGGGTGTGTGAGGAACACGGATTTGAATTGTTCCACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACTAGCAGCGTGTTTATAAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATTGATATCACAAACGGAGGAAGTGGCTGTATTATGTGGATTGGTCAACTCTTTGACATGAGTGTCTACCGTACGGATGGCCAAGATCTCTATGTCAGATTGGCTGCAGCTGATATAGGATCTACTAACTCCAACAAGAATCATAGAGTAGTACAGGCTATTAGCATCACACTTACTGCACTTGTTTTAGTTTTTGGATTGGTTGCTATTTGTTACTTATGGAAGAAGGGAAAACAAAGATCTAGAGCTGCTATTTCAGGTTTTGTCCACAGAAATCATGATTGGTTAATGAATGAGGTGGTGCCTTCTAGAAGATACTTGGGTGATGAAAGGAACATGGATGATCTAGAGTTGCCAATGTTTGATTTTGATACCTTAATGATGGCTACGAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGGGGCAGATTGATTGAAGGCCAAGAAATTGCTGTGAAAAGATTGTCAGAAGACTCTGGACAAGGAATTGAAGAATTTAAAAATGAAGTCAAATCAATTGTCAAGCTGCAACACCGAAATCTTGTTCGGTTGCTTGGTTGCTGCATTAAGAAAAATGAGAAGATGTTGGTGTATGAATATATGGAAAATAGAGGCCTTGATTCCATTTTGTTTGACAAATCAAAAAGATCATTGCTTGATTGGGAAAAGCGTTACAATATTATATATGGGATAGCAAGAGGACTTCTTTATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTCAAGACAAGTAACATATTATTAGATAACGAAATGAATCCAAAGATATCAGACTTTGGATTAGCTAGAATTCTTAACAAAGATCAAATCCAAGCAAAAACATTAAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTTTCAGTAAAATCTGACGTTTTTAGCTTTGGAGTTATTGTATTGGAGATTATAACTGGAAAGAAGAATAGAGAATTTTATAGTGATGACGATGAATTGAATCTTTTGGGATATGTATGGAGGCATTGGCATGAAGGAACTGTATTAACACTGATTGATCCATCTATTGGCAATTCATACACAGAATCTAAAGTTATAAGGTGCATACATATTGGTCTCTTATGTGTTCAAGAATGTGCAGAAGATAGACCAACAATGTCTTCAGTAGTCTTAATGTTGAGCAGTGAAGCTCTGTCAATGCCATCTCCTAAGAACCCTGGATTTTCCATTAAAAAAAACCATTTAAACATAGATTTATCTCCAAGCAAACAAGATATAACATGGAGTGTAAATCAAGTCACTATCACAATGTTAGATGGTAGATAG 2517 0.3957 MRIFFTHLIDYIIIVIGFFFITPSTSFDTLTGTQILRTNQTLLSQNQSFVLGFFRGSNTNYYLGIWYNNINPQTIVWVANRDNPIETSTGYLKIGDNGNFVLLNSSGNPAWSSNQTHAKNPVLQLLDTGNLVLKDSSDKTNNNYLWQSFEYPTDTLLPGMKVGWNLDTGTEKHLTSWKVTGEDPSSGDYTLKIDYHGLYETLLRRNQTIICRSGPWNGERFSGNPAMKDNTDGLKFNFTYDDHGAWYSFSVTRPSLSRIIVTSDSDGEFQRYLWIQGRWNKFWYKPSDQCDHYRECGPYGVCDNNASPVCTCMKGFSPKNPQAWNLRDGSDGCVRNTDLNCSTDKFLHLENMKLPETSSVFINKSMTLDECGSLCKRNCSCTAYANIDITNGGSGCIMWIGQLFDMSVYRTDGQDLYVRLAAADIGSTNSNKNHRVVQAISITLTALVLVFGLVAICYLWKKGKQRSRAAISGFVHRNHDWLMNEVVPSRRYLGDERNMDDLELPMFDFDTLMMATNNFSQDNKLGEGGFGSVYRGRLIEGQEIAVKRLSEDSGQGIEEFKNEVKSIVKLQHRNLVRLLGCCIKKNEKMLVYEYMENRGLDSILFDKSKRSLLDWEKRYNIIYGIARGLLYLHQDSRFRIIHRDLKTSNILLDNEMNPKISDFGLARILNKDQIQAKTLRIVGTYGYMSPEYAMDGNFSVKSDVFSFGVIVLEIITGKKNREFYSDDDELNLLGYVWRHWHEGTVLTLIDPSIGNSYTESKVIRCIHIGLLCVQECAEDRPTMSSVVLMLSSEALSMPSPKNPGFSIKKNHLNIDLSPSKQDITWSVNQVTITMLDGR* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0567 838 PIRSF SRK 1 838 IPR024171 GO:0004674
Ahy20g0567 838 SMART blect_4 33 152 IPR001480 -
Ahy20g0567 838 Gene3D - 23 149 IPR036426 -
Ahy20g0567 838 Pfam PAN-like domain 341 406 IPR003609 -
Ahy20g0567 838 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Ahy20g0567 838 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 217 IPR036426 -
Ahy20g0567 838 CDD STKc_IRAK 525 790 - -
Ahy20g0567 838 ProSiteProfiles Protein kinase domain profile. 519 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0567 838 Pfam Receptor serine/threonine kinase 476 509 IPR022126 GO:0004674
Ahy20g0567 838 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 837 - -
Ahy20g0567 838 Gene3D Hepatocyte Growth Factor 338 421 - -
Ahy20g0567 838 Pfam D-mannose binding lectin 74 178 IPR001480 -
Ahy20g0567 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Ahy20g0567 838 Pfam Protein tyrosine and serine/threonine kinase 521 788 IPR001245 GO:0004672|GO:0006468
Ahy20g0567 838 SUPERFAMILY Protein kinase-like (PK-like) 504 809 IPR011009 -
Ahy20g0567 838 SMART serkin_6 519 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0567 838 ProSiteProfiles PAN/Apple domain profile. 341 421 IPR003609 -
Ahy20g0567 838 Pfam S-locus glycoprotein domain 212 320 IPR000858 GO:0048544
Ahy20g0567 838 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Ahy20g0567 838 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Ahy20g0567 838 SMART ntp_6 341 420 IPR003609 -
Ahy20g0567 838 Gene3D Phosphorylase Kinase; domain 1 494 594 - -
Ahy20g0567 838 CDD B_lectin 33 152 IPR001480 -
Ahy20g0567 838 PANTHER - 13 837 - -
Ahy20g0567 838 CDD PAN_AP_plant 337 421 - -
Ahy20g0567 838 Gene3D Transferase(Phosphotransferase) domain 1 595 799 - -
Ahy20g0567 838 Pfam Domain of unknown function (DUF3403) 792 838 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0567 Ahy-Chr20 5970315 5973765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0567 495 838 Receptor kinase-like Gene Family AT4G23150 54.310 7.94e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g0567 PK_Tyr_Ser-Thr 6.60E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0567 - - aip:107621495 1366.29