Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0566 ATGAGAATCTTCTTCACTCACCTTAACTCCCTCATCATCCTTGTTATTAGCTTCTTCTTCTTTATCACTCCATCAACCTCTTTGGATACTTTAACCGGGACTCAAATCCTCACAACCAACCAAACCTTGTTGTCAAAAAACCAAACCTTCGTTCTAGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAATCCTCGAACAATAGTTTGGGTTGCAAACAGAGACAACCCCGTTGACAACTCTACCGGCCATCTCAAGATTGGAGACAACGGAAACTTTGTCCTCCTCAATTCATCCGGGAAACCCGCATGGTCCTCCAACCAAACCAGCGCCAAGAATCCAGTTCTTCAGCTCCTCGATACCGGTAACCTTGTTCTCAAAGATTCATCAGACAAGACCAATAATAACTACTTATGGCAGAGCTTTGATTACCCAACGGATACCGTGTTACCGGGGATGAAGATCGGTTGGAACTTGGACACAGGAACGGAGAAGCATTTAACATCATGGAAGGTTACAGGTGAAGACCCTTCAAGCGGTGACTTCACTATGAAGTTAGATTACCATGGTTTACCTGAGGCTTTCCTCAGGAAAAACCAAACTATAATATTCCGAACTGGTCCTTGGAATGGTGAGGGATACAGTGGGATCCCGGCGATGAAAAACAACATCGACGGTCTCAAGTTCAATTTCACTTATGATGAGCACAGTGTGTGGTACTCTTTTTCCATTACAGAACCTTCCTTGTTGCCGAGGATAATTGTGACATCTGATACTGATGGCGAGTTTCAACGCTACATGTGGATACAAGGAAGTTGGAACAAGTTCTGGTATCAACCAGCGGATCAATGCGATTACTATAGACAGTGTGGTCCGTACGGAGTGTGTGACGAGAATGCTTCATCGATTTGCAAGTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGATCTGATGGGTGTGTGAGGAACACGGTTTTGAATTGTTCCACTGACAAGTTCTTGCATCTTGAGCACACGAAGCTGCCGGAGACAAGCAGTGTGTTTGTGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGATATCAGAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGTCAACTCATTGACACGAGAGTCTACAGTACGGATGGCCAAGATCTCTATGTCAGATTAGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGTAGTCCAGGCTGTTGGCATCACACTTATTTTAGTTTTGGGATTGGTTGCTATTTGTTACCTAATGAAGAAGAGTAAACAAAGATCTAGAGGTTTTGTCCGCAGAAGTCATGATTGGATAATGAATGCGGTGGTGTTTTCTAGAAAACACTTAGGTGATGAAAGGAACATGGATGATCTGGAATTGCCAATGTTTGATTTCGATACCTTAACAATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGAGGAAGATTGATTGAAGGCCAAGAGATTGCTGTGAAGAGATTATCAAAGAATTCTGGACAAGGAAATGAAGAGTTCAAGAATGAAGTCAAGTTAATTGTCAAGCTGCAACACCGAAATCTTGTTCGGTTGCTTGGTTGCTGCATTGAGAAGGATGAGAAGATGTTGGTGTATGAGTATATGGAAAATAGAGGCCTTGATTCCATTTTATTTGGTAGTATTGTTTATTTCAATATTTTCTACTTTCTGATTATGATCTATATTTGTTTTGCTCTTATCCTTAGTTTATATGTATTAATAATAACTGATGTTGCAGACAAATCGAAAAAACCCTTGCTTGATTGGGAAAGACGTTTCAATATTATATATGGGATAGCCAAAGGGCTTCTTTATTTGCATCAAGATTCGAGATTTCGAATTATTCATAGAGATCTCAAGACAAGTAACATATTATTAGATAATGAAATGAATCCAAAAATATCAGACTTTGGAATGGCTAGAATTTTTGACAAAGATCAAATGCAAGCAAAAACATTAAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTTATGGTATTGGAGATTATAACTGGAAAAAAGAATCGAAAGTTTTACAGTGATAACAATGAATTGAATCTTCTAGGAAATGTATGGAGGCATTGGCATAAAGGAACTGCACTGACACTAATTGATCCATCCATTGGCAATTCATATGCAAAATCTAAAGTTATGAGATGCATACATATTAGTCTCTTATGTGTACAAGAACGTGCAGAAGATAGACCAACAATGCCTTCAGTGGTCTTAATGTTGAGTAGTGAAGCTCCATCAATGCCAAAACCTAAAATTCCTGGATTTTACGCAAGGACAAATGATCCAGAGATTGATTCATCTTCAAACAAGCAAAATGAAATATGGAGTGTGAATCAAGTCACAATCACAATGTTAGATGCTAGGTAG 2604 0.3948 MRIFFTHLNSLIILVISFFFFITPSTSLDTLTGTQILTTNQTLLSKNQTFVLGFFRGSNTNYYLGIWYNNINPRTIVWVANRDNPVDNSTGHLKIGDNGNFVLLNSSGKPAWSSNQTSAKNPVLQLLDTGNLVLKDSSDKTNNNYLWQSFDYPTDTVLPGMKIGWNLDTGTEKHLTSWKVTGEDPSSGDFTMKLDYHGLPEAFLRKNQTIIFRTGPWNGEGYSGIPAMKNNIDGLKFNFTYDEHSVWYSFSITEPSLLPRIIVTSDTDGEFQRYMWIQGSWNKFWYQPADQCDYYRQCGPYGVCDENASSICKCMQGFRPKNQEAWNLRDGSDGCVRNTVLNCSTDKFLHLEHTKLPETSSVFVNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLGQLIDTRVYSTDGQDLYVRLAAADIGSTSSNKNHRVVQAVGITLILVLGLVAICYLMKKSKQRSRGFVRRSHDWIMNAVVFSRKHLGDERNMDDLELPMFDFDTLTMATNNFSQDNKLGEGGFGSVYRGRLIEGQEIAVKRLSKNSGQGNEEFKNEVKLIVKLQHRNLVRLLGCCIEKDEKMLVYEYMENRGLDSILFGSIVYFNIFYFLIMIYICFALILSLYVLIITDVADKSKKPLLDWERRFNIIYGIAKGLLYLHQDSRFRIIHRDLKTSNILLDNEMNPKISDFGMARIFDKDQMQAKTLRIVGTYGYMSPEYAMDGNFSIKSDVFSFGVMVLEIITGKKNRKFYSDNNELNLLGNVWRHWHKGTALTLIDPSIGNSYAKSKVMRCIHISLLCVQERAEDRPTMPSVVLMLSSEAPSMPKPKIPGFYARTNDPEIDSSSNKQNEIWSVNQVTITMLDAR* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0566 867 Pfam Receptor serine/threonine kinase 471 504 IPR022126 GO:0004674
Ahy20g0566 867 CDD B_lectin 34 153 IPR001480 -
Ahy20g0566 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 669 681 IPR008271 GO:0004672|GO:0006468
Ahy20g0566 867 SMART blect_4 34 153 IPR001480 -
Ahy20g0566 867 Pfam D-mannose binding lectin 75 179 IPR001480 -
Ahy20g0566 867 CDD STKc_IRAK 520 819 - -
Ahy20g0566 867 Gene3D Hepatocyte Growth Factor 338 423 - -
Ahy20g0566 867 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Ahy20g0566 867 SUPERFAMILY Protein kinase-like (PK-like) 499 847 IPR011009 -
Ahy20g0566 867 Pfam Protein tyrosine and serine/threonine kinase 516 816 IPR001245 GO:0004672|GO:0006468
Ahy20g0566 867 Pfam PAN-like domain 343 408 IPR003609 -
Ahy20g0566 867 ProSiteProfiles PAN/Apple domain profile. 343 423 IPR003609 -
Ahy20g0566 867 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Ahy20g0566 867 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 866 - -
Ahy20g0566 867 PIRSF SRK 631 867 IPR024171 GO:0004674
Ahy20g0566 867 PIRSF SRK 1 604 IPR024171 GO:0004674
Ahy20g0566 867 ProSiteProfiles Protein kinase domain profile. 514 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0566 867 CDD PAN_AP_plant 339 423 - -
Ahy20g0566 867 SMART serkin_6 514 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0566 867 SMART ntp_6 343 422 IPR003609 -
Ahy20g0566 867 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Ahy20g0566 867 Gene3D Phosphorylase Kinase; domain 1 489 589 - -
Ahy20g0566 867 Gene3D - 24 150 IPR036426 -
Ahy20g0566 867 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 218 IPR036426 -
Ahy20g0566 867 PANTHER - 13 866 - -
Ahy20g0566 867 Pfam Domain of unknown function (DUF3403) 821 867 IPR021820 GO:0004674
Ahy20g0566 867 Gene3D Transferase(Phosphotransferase) domain 1 627 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0566 Ahy-Chr20 5952058 5966557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0566 502 867 Receptor kinase-like Gene Family AT4G11530 53.100 2.41e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g0566 PK_Tyr_Ser-Thr 6.00E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0566 - - aip:107621495 1363.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0566 20 5952058 5966557 Ahy20g0566 20 5952058 5966557 ECH