Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0565 ATGGCTACTGTGTTTTACCAACACGTGTCTATTCTGTTTTTGCTCTGTTTCTTCTTCTTCCTCTGTTTCTGTGCTATGTTTTCTGCTGCAGCTGCCAGGTCCAGCATCACAACCGCTCAGTTCATTAGGAACCGTGACAATCTCGTCTCAGATGGAAACAACTTCGAAATGGGTTTCTTCACTTATGATAATTATAACAACACTTACGTTGGGATTTGGTACTACACCATTCCTCAACCATACGTCATATGGGTCGCTAACAGAGACTACCCCATCAAAGGCGATGGTGGCGCTATAACTATCCAACAAGATGGAAACTTGGTTATCTTCGATGAACAAAAGCGCAAAGTATGGTCAAGTAATGTCACGATTTCTGCGAATAACAAGACCACTGAAGCTGTTCTTGGTGATGATGGAAACCTCGTACTTACACTCACAGATTCTGGGAAAAAGGTATGGCAGAGCTTTGAGGATCCAAGCGATACGTATTTACCGGGTATGAAGGTTCCAGCGAATCCTTCAAAGGGGAAGAAGAACTTTGTCTTCACTTCATGGAAATCAGCCAAGGACCCTTCAACTGGGAAATACACAATGGGGGTTGATCCTGAGAGTTTGCCTCAGATTGTGGTTTGGGAAGCAGGGGAAAGAAGGTGGAGGAGTGGTTACTGGAATGGAGGAGTCTTCACTGGTGTGGACATGACAGGAAGCGTGCTAGAGGGTTTCACTATTAACAAAGGCGATAAAAGCTCTTACTTTTCTTATAGCGTGCCCAATGGTAGTGATAAGGTAAGGTTTCAGATAACTTGGGATGGGTATGAGAAAGAGTTGAAGTGGGATCCTTCTCAGAAACAATGGAATGAGACACAGAGAGGGCCTTCTAATGATTGTGAGGTTTACAACAAGTGTGGTAGTTTCTCAGCTTGTGATATTAGTTCAGGTTCACCTGTTTGTAAGTGCTTAAAAGGGTTTCAACAAAGAGGTGGTGTTGGTGGTGGGTGTAAGAGGGTGACACCACTCAAAGCTGAAAAGACAACCTCTGAGGTTGGTGTCAAAGAAGATGGATTCCAGAGGCGTCGCTGCATGAGGCTGCCCGATTTTGCGCAGCAAGGAAACCCCCTTGGCGCTGACAACTGTGAGAGCTTTTGCTTGAAGAATAGTTCTTGCACTGCTTATGCTAATGTTAGTGGGATTGGGTGCATGGTTTGGTATGGGGAGTTGGTTGATCTTCAAGATTTTAGAGGAAATGTAGGAGAAACACTTTTCATTCGTTTAGCTGCTTCTGATTTAGTTACAGATGATGGAGGGAAAAAGAACAAGATTGTGATAGTAACAGCTATTATAGCAGGATTAATCTCTATAGGGATTTTTGTATTTATAGTATGGAGGTGCAAGGCAAAACTCAAACTCAAAGCTGCAGTTTCGTCCGCTTCATGTCGCAAGAATAGTGATGTAATACCAATTTATGATGCAAGCAAGAGTAAAGAGATGTCGACAGAATTTTCAGCATCAGCTGATCTTAGTTTGGAGGGTAATGAGCTAAGTGGACCAGAACTTCCACTTTTCAATTTTAATTGCATTTCCATAGCCACAGACAACTTTTCACAAGGAAATAAGCTTGGGGAAGGGGGTTTCGGTCCTGTTTATAAGGGAAAGCTTCCAAGTGGAGAACAAATAGCTGTCAAAAGGCTTTCAAGACATTCCTGCCAAGGTTTGGAGGAGTTCAAGAATGAAATGATGCTGATAGCCAAACTACAACACAGAAATTTGGTTAGACAAATGGGTTGCTCTATTCGCGGTGAAGAAAAATTGCTTGTATATGAGTACATGCCGAACAAAAGCTTGGATCGCTTTTTATTTGATCCGGTCAAGCAAACAGAGTTAGACTGGGCAAGACGCTATGATATAATTGAAGGCATTGCAAGAGGACTACTTTATCTACATCGAGATTCAAGACTAAGAATAATTCATCGAGATCTAAAAGCAAGCAATATTTTATTGGACGAAAACATGAACCCAAAAATCTCAGACTTCGGGCTGGCCAGGATATTTGGTGGAAACCAGAACGAAGGCAATACAACCAGAGTGGTTGGTACATATGGTTATATGGCTCCAGAATATGCAATGGAAGGTCTATTTTCAGTTAAATCCGATGTATATAGTTTTGGTGTATTACTATTAGAGATTGTGAGTGGTCGGAGGAACACTAGCTTTCGTCACTCAGATGACACAAGTCTCATTGGATATGCATGGCATCTTTGGAATGAAGGCAGAGCAATGGAGCTTGTAGACCCTTGCATACGTGAATCAAGTCCTAAAGACAAAGCTTTGAGGTGCATAAACATAGGAATGTTGTGTGTGCAAGATTCAGCATCTCATAGACCAAACATGTCCAATGTAGTGTTGATGCTAGAAAGTGAGACAACCACTCTTCCATTACCTTCACAACCTTTGGTCACTTCCATGAGGAGATCTGAGGACAGAGAATTTCATATGGAAGGTCTTGATGTTTCAAATGATTTAACTGTCACAATGGTGGTTGGAAGATAG 2547 0.4205 MATVFYQHVSILFLLCFFFFLCFCAMFSAAAARSSITTAQFIRNRDNLVSDGNNFEMGFFTYDNYNNTYVGIWYYTIPQPYVIWVANRDYPIKGDGGAITIQQDGNLVIFDEQKRKVWSSNVTISANNKTTEAVLGDDGNLVLTLTDSGKKVWQSFEDPSDTYLPGMKVPANPSKGKKNFVFTSWKSAKDPSTGKYTMGVDPESLPQIVVWEAGERRWRSGYWNGGVFTGVDMTGSVLEGFTINKGDKSSYFSYSVPNGSDKVRFQITWDGYEKELKWDPSQKQWNETQRGPSNDCEVYNKCGSFSACDISSGSPVCKCLKGFQQRGGVGGGCKRVTPLKAEKTTSEVGVKEDGFQRRRCMRLPDFAQQGNPLGADNCESFCLKNSSCTAYANVSGIGCMVWYGELVDLQDFRGNVGETLFIRLAASDLVTDDGGKKNKIVIVTAIIAGLISIGIFVFIVWRCKAKLKLKAAVSSASCRKNSDVIPIYDASKSKEMSTEFSASADLSLEGNELSGPELPLFNFNCISIATDNFSQGNKLGEGGFGPVYKGKLPSGEQIAVKRLSRHSCQGLEEFKNEMMLIAKLQHRNLVRQMGCSIRGEEKLLVYEYMPNKSLDRFLFDPVKQTELDWARRYDIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEGNTTRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEIVSGRRNTSFRHSDDTSLIGYAWHLWNEGRAMELVDPCIRESSPKDKALRCINIGMLCVQDSASHRPNMSNVVLMLESETTTLPLPSQPLVTSMRRSEDREFHMEGLDVSNDLTVTMVVGR* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0565 848 Pfam PAN-like domain 351 409 IPR003609 -
Ahy20g0565 848 ProSiteProfiles Bulb-type lectin domain profile. 33 156 IPR001480 -
Ahy20g0565 848 Pfam S-locus glycoprotein domain 218 325 IPR000858 GO:0048544
Ahy20g0565 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Ahy20g0565 848 PIRSF SRK 5 848 IPR024171 GO:0004674
Ahy20g0565 848 ProSiteProfiles PAN/Apple domain profile. 350 425 IPR003609 -
Ahy20g0565 848 CDD B_lectin 48 159 IPR001480 -
Ahy20g0565 848 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 848 - -
Ahy20g0565 848 Gene3D Transferase(Phosphotransferase) domain 1 609 811 - -
Ahy20g0565 848 Gene3D Phosphorylase Kinase; domain 1 509 608 - -
Ahy20g0565 848 CDD STKc_IRAK 539 804 - -
Ahy20g0565 848 CDD PAN_AP_plant 349 425 - -
Ahy20g0565 848 Pfam D-mannose binding lectin 82 186 IPR001480 -
Ahy20g0565 848 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 2 848 - -
Ahy20g0565 848 SMART blect_4 39 159 IPR001480 -
Ahy20g0565 848 SMART serkin_6 533 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0565 848 ProSiteProfiles Protein kinase domain profile. 533 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0565 848 SUPERFAMILY Protein kinase-like (PK-like) 518 828 IPR011009 -
Ahy20g0565 848 Gene3D - 28 156 IPR036426 -
Ahy20g0565 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 191 IPR036426 -
Ahy20g0565 848 Pfam Protein tyrosine and serine/threonine kinase 535 801 IPR001245 GO:0004672|GO:0006468
Ahy20g0565 848 SMART ntp_6 350 424 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0565 Ahy-Chr20 5935893 5939871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0565 434 816 Receptor kinase-like Gene Family AT4G23230 52.344 4.79e-130 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g0565 PK_Tyr_Ser-Thr 3.60E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0565 - - aprc:113869342 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0565 20 5935893 5939871 Ahy10g0373 10 3437046 3441080 hybridization
Ahy20g0565 20 5935893 5939871 Ahy3g2974 3 126353040 126359961 PCT