Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0564 ATGATGTTACTTCACTTCATCAAAGGTGACATACACATACCAGTTTTGCTGCTACTAACACTTAGCTTCTGCCATGTTGCAAATTCCTTATTAGACACCATAACCTCCTCTAATTACATCCTTAAGGACCCCGAAACCTTAATCTCCACCAACACTTTGTTCCATCTAGGATTCTTCACTCCTTCTAACTCATCAACCTTGTCCTACCTCGGAATTTGGTACATGTCCAAATCCTCTGTGGTCTGGGTTGCCAACAGAAACCAACCTATAAAGGATTCTTCTTCAGGGCATCTCAAAATATCTGAGGATGGAAACCTTTATGTCATGAACCAACAGAAGCAGATTCTTTGGTCATCAAACATCACAAATATTACATCCAACACAACGGCACAGCTTCAGAACACCGGAAACCTTGTGTTGCAAGAAATCACCACAGGAAGGATCCTTTGGCAGAGTTTCCAGCACCCTGCAGATACTTTCTTGCCGAAAATGGAGCTTAGCACCAATGAGATTACCGGCCAGAGAGTGAAACTCACCTCATGGAGAACTCCTAATGATCCATCCAAAGGAGACTTCACTATGAGTCTTGAACCCCTTCACATCGCTCAAGTGTTCATATGGAGAGGAACTCAACCTTATTGGAGAAGCGGTCCATGGAACGGTCAAGTTTTTATTGGGATACCTACTATGAACGCGAACTATCTTGACGGGTTCTCCTTAGATGGTGAAGGTGAAACCAACGGCACTTACTACCTCTCATACAACTATGCGAATGTGTCAATGATGTATGTGTTGAGTTCTGATGGAAACCTTCATGAAACCTATTGGGATTATGCAAAGAGAGATTGGATTGTGGACTGGTCTGCTGTAAGCTCTGTGTGTGATTTTTATGGAGAGTGTGGTCCCTTTGGAAGCTGTGATCCTAAAAATTCACCTATCTGCAGCTGTTTGAGAGGGTTTGAGCCAAAGAATGCTCAAGAGTGGAATAAACAAAACTGGAGCAGCGGTTGTGTGAGGAAGAAGCCTCTGCAGTGTGATGAGAGAGTCAGAAATAATAGGAGTAGTGATGGGTTTGTGAAGCTGCAAAATGTCAAGGTTCCAGATTTTTCACAGTGGTTGTCTTCCATTGCTTATGATTGCAGAACTGAGTGCTTGGCAAATTGCTCTTGCATTGCATACGCTTATGATTCTGGCATTGGCTGCATGTTATGGTGTGGAAACTTGATTGACATACAGCAGTTCTCAATGGGAGGAATTGATCTTTACATTCGAGTTCCCTCTTCGGAACTTGAGAAGAAAAATCACACACTGATCATAGTTCTTTCGGTCATAATAGCAATGGCTCTTATTGTGGCTTGTGCATATATCTTGAGGAAAAGGGCAATCAGAGGAGTGAAAGCACTTCAAAGAATTCAGAGAAGAAGTTATGTTAATGATACAAGTCAAGTTGAACTTCCGGAGAATTCACTATTTGAGCTTGAAAAGCTTGCTACTGCAACAAACAACTTCCACTCCAATAATAAGCTAGGACAAGGTGGTTTTGGATCTGTATATAAGGGTAGATTGGAAGATGGACAGGAGATAGCAGTTAAAAGACTTTCAAAAACATCTGGACAAGGTGTAGAAGAATTTATGAATGAAGTTATGGTAATATCAAAACTTCAACATCGAAATCTTGTCAGCCTTCTTGGATGTTGCATCGAAAGAGATGAAAAGATTTTGATCTATGAATACCTACCAAACAGAAGTTTGGATGCACATATATTTGATCCGCCTAAACAAAAGGTATTAAATTGGGAAAAACGTTTTAACATACTTGAAGGAATCGCTCGAGGTCTACTTTATCTTCACAGAGATTCTAGATTAAAGATTATACACAGAGACTTGAAATTAAGTAATATATTGTTAGATGACGAGTTAAATCCGAAAATATCAGATTTTGGTATGGCAAAAATTTTTGAGAATGCTGAAAATGAGGCCAATACTAGAAGAATTGTTGGAACATTTGGTTATATATCACCAGAATATGCTCTACAAGGACTATTTTCAGAAAAATCAGACGTATTTAGTTTCGGTGTTTTACTTTTGGAGATTATTAGTGGCAGAAAAAATAGCAGCTTTTATGAGAATGTTGAATCTTTGAGCCTTTTGGGGTTTGCATGGAAATTGTGGAGAAATGACAACATAGCATCACTAATAGATCCAGAAATATCAAATCCAAGCAATAAAAAAGACATAACGAGGTGCATACATATTGGTCTTTTGTGTGTACAAGAACTTGCAAGCTATAGGCCTACTATGACTGCAGTAATTTCGATGCTTAATAGTGAGACTGTTAATCTTCCTCCTCCCAAACAGCCAGCATTCATTCAAATACAGACAATGATAGATGTAGAGTCTTCTCTTAGAAATGATGGAGCATGTTCCATCAATTACATGAGTCTAACAAACATCCAAGGAAGATAA 2466 0.3917 MMLLHFIKGDIHIPVLLLLTLSFCHVANSLLDTITSSNYILKDPETLISTNTLFHLGFFTPSNSSTLSYLGIWYMSKSSVVWVANRNQPIKDSSSGHLKISEDGNLYVMNQQKQILWSSNITNITSNTTAQLQNTGNLVLQEITTGRILWQSFQHPADTFLPKMELSTNEITGQRVKLTSWRTPNDPSKGDFTMSLEPLHIAQVFIWRGTQPYWRSGPWNGQVFIGIPTMNANYLDGFSLDGEGETNGTYYLSYNYANVSMMYVLSSDGNLHETYWDYAKRDWIVDWSAVSSVCDFYGECGPFGSCDPKNSPICSCLRGFEPKNAQEWNKQNWSSGCVRKKPLQCDERVRNNRSSDGFVKLQNVKVPDFSQWLSSIAYDCRTECLANCSCIAYAYDSGIGCMLWCGNLIDIQQFSMGGIDLYIRVPSSELEKKNHTLIIVLSVIIAMALIVACAYILRKRAIRGVKALQRIQRRSYVNDTSQVELPENSLFELEKLATATNNFHSNNKLGQGGFGSVYKGRLEDGQEIAVKRLSKTSGQGVEEFMNEVMVISKLQHRNLVSLLGCCIERDEKILIYEYLPNRSLDAHIFDPPKQKVLNWEKRFNILEGIARGLLYLHRDSRLKIIHRDLKLSNILLDDELNPKISDFGMAKIFENAENEANTRRIVGTFGYISPEYALQGLFSEKSDVFSFGVLLLEIISGRKNSSFYENVESLSLLGFAWKLWRNDNIASLIDPEISNPSNKKDITRCIHIGLLCVQELASYRPTMTAVISMLNSETVNLPPPKQPAFIQIQTMIDVESSLRNDGACSINYMSLTNIQGR* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0564 821 Pfam S-locus glycoprotein domain 214 324 IPR000858 GO:0048544
Ahy20g0564 821 SUPERFAMILY Protein kinase-like (PK-like) 489 802 IPR011009 -
Ahy20g0564 821 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 16 811 - -
Ahy20g0564 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 221 IPR036426 -
Ahy20g0564 821 Pfam D-mannose binding lectin 80 182 IPR001480 -
Ahy20g0564 821 CDD PAN_AP_plant 342 426 - -
Ahy20g0564 821 Gene3D Phosphorylase Kinase; domain 1 464 578 - -
Ahy20g0564 821 Pfam PAN-like domain 353 411 IPR003609 -
Ahy20g0564 821 SMART serkin_6 503 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0564 821 Gene3D Transferase(Phosphotransferase) domain 1 579 781 - -
Ahy20g0564 821 CDD B_lectin 38 156 IPR001480 -
Ahy20g0564 821 ProSiteProfiles PAN/Apple domain profile. 345 426 IPR003609 -
Ahy20g0564 821 SMART blect_4 38 156 IPR001480 -
Ahy20g0564 821 SMART ntp_6 353 425 IPR003609 -
Ahy20g0564 821 Gene3D - 26 154 IPR036426 -
Ahy20g0564 821 PANTHER - 16 811 - -
Ahy20g0564 821 PIRSF SRK 6 821 IPR024171 GO:0004674
Ahy20g0564 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Ahy20g0564 821 Pfam Protein tyrosine and serine/threonine kinase 505 774 IPR001245 GO:0004672|GO:0006468
Ahy20g0564 821 ProSiteProfiles Protein kinase domain profile. 503 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0564 821 CDD STKc_IRAK 509 775 - -
Ahy20g0564 821 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Ahy20g0564 821 ProSiteProfiles Bulb-type lectin domain profile. 32 153 IPR001480 -
Ahy20g0564 821 Pfam Domain of unknown function (DUF3403) 776 821 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0564 Ahy-Chr20 5900433 5905027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0564 472 789 Receptor kinase-like Gene Family AT4G11530 57.276 5.21e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g0564 PK_Tyr_Ser-Thr 2.30E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0564 - - ahf:112714694 1110.9