Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0563 ATGGTTATGGGACTAAGTAGTCACTTTATAAACTCACAAGTTTTGCTAACACTTTGCTTTAGTTTCTTCCTACATGATGCTGGAAGTTCCTTAGACACCATCACTTCCTCTTACATCCTTAAAGCCCCCGAAACTTTAAGCTCTAATGATGGTATGTTCCATCTAGGATTCTTCACCCCTACCAACTCCACCTTTTCCTACCTCGGAATCTGGTACATAACCAAACCTCCTTTGGTGTGGGTTGCCAACAGAGACCAACCAATAAAAGATTCTTCTTCTTCTTCCTCTGGTGTGCTCAAGATATCTAAAGACGGAAACCTTGTTCTGCTGAATTCACAAGATGACATCCTTTGGTCTACAAATGCGTCCAATATTTCATCTAATACAACCGCTAAGCTTCTGAACACCGGAAACCTTGTGCTGCAAGAAAACGCGACAGGAAGGATCCTATGGCAGAGTTTCCAACACCCCACAAACGCTTTCTTGGAGGGAATGGAACTCAGCACCGGTAACATCAGCGGCGTCCAGAGAACAAAACTCACCTCGTGGAAAAGTCATGAGGATGCATCCATTGGAGAATTCTCAATGAGTCTTGAACGCCTGAATATCCCGGAAGTGTTGGTGTGGAGAGGGAGCCAACCTCACTGGCGTAGTGGTCCATGGAATGGTCAAATATTTCTGGGGATACCTGACATGGCAACCAACTATCTTTTCGGGTTTTACTTAAGTCAAGATAACGGCAATACTAATTACTATCTTGCTTACAACTACGGGAATCAAACTTTTCCTGTATACTACTTATTAAGTGTTGATGGAAATGTATACCAAGTATCTTGGGATCCTGAAAAGAGAGATTGGTATATCTCCTGGTTAGCTATAAGTTCAGAGTGTGATGTGTATGGCAAGTGTGGAGAGTTTGGAATTTGTGATCACAGGAGCACTCCGATTTGCAGGTGTTTGAGAGGGTATAAGCCAAGGAATGATGAGGAATGGAGCAAACAGAACTGGAGCAGCGGTTGTGTTAGGAAGGAACCTTTTCAGTGTGAGAGTGAGAGTGTCAAAAATAATAAAGAAGATGGATTTGTGAAGATGCAGAATGCTAAGGTTCCAGCCTCTATCTTGTCCTATGCGGCCGAGGATGATTGCAAAGCTGAGTGCTTAGGCAACTGCTCCTGCACAGCATATGCATATGATGCTGGCACTGGCTGCATGTCATGGATTGGAAGCTTAATTGATCTTCAGATATTCTCAACTGGAGGAACTGATCTTTACATTCGAGTTCCCTATGCAGAGCTAGGTGAAGACAAGAAAAATGTCACAGTGGTCATTGCAGTGTCAGTGATAGTAGGAACCACTATCATTCTCACCTGTGCTTATATCTTCTGGAAAAGGATTCAAATCAGAGAGAGAGTGAAAAACAAACTAAGGAGAGAAGACAATGACCTAGTAAAACTCCCAGAGCTTTCCCAATTTGAGTTTGAAAGACTTGTTGCTGCAACAAATAACTTCAATCTATCTAATAAGCTAGGAGAAGGAGGTTATGGACCAGTATATAAGGGAACATTGGAAGATGGACAGGAAATAGCAGTGAAAAGGCTTTCAAGATCATCCGGGCAAGGATATGAAGAATTTATGAATGAGGTTATGGTAATATCAAAGCTTCAACATCGTAATCTTGTTAGACTTTTTGGATGTTGTATAGAAGGAGAAGAGAAGATTTTGATCTATGAGTACATGCCAAACAAAAGTCTAGATGCATATATGTTTGATCAATCAAACCAGATATTGAATTGGGAAAAACGTTTTAGTATAATCGATGGAATAGCTCGGGGTTTACTTTATCTTCACAGAGATTCTAGACTGAGAATTATACATAGAGATTTGAAGTTGAGTAACATACTGCTTGATGAAGAGTTAAATCCAAAAATTGCGGATTTTGGCCTGGCAAAAATTTTTAGTCGAACCGAAGATGCAGTCAATACTAGAAGAGTTGTTGGAACATACGGCTATATGTCACCAGAATATGCTATGGAAGGACTATTTTCAGAGAAATCTGATGTATTTAGCTTTGGTGTTTTGCTGTTGGAGATTGTGAGTAGAAGAAAAAATACCAGCTTTTGTGAAGATTCTAAATCTTTGAGCCTCTTGGGATTTGCATGGAATTTATGGAATGCTGATAACACTGCATCTCTAATAGATCCAGAAATATCAAGTTCATGCAACAAAGAAGATATAATGAGGTGCATACATATTGGTCTTCTATGTGTACAAGAACTTGCAAGAGATAGGCCTACAATGACTGCAGTGGTTTCAATGCTTAATAGTGAGACTGTTAATCTTCCTTCTCCCAAGCAGCCAGCATTCGTTCAGAGGCAGACTCTGCTGGATATAGAGTCTTCTATGACAAATGATGGATTTTGCTCGATTAATAATGTGAGCCTAACAAATGTCCAAGGAAGATAA 2463 0.4032 MVMGLSSHFINSQVLLTLCFSFFLHDAGSSLDTITSSYILKAPETLSSNDGMFHLGFFTPTNSTFSYLGIWYITKPPLVWVANRDQPIKDSSSSSSGVLKISKDGNLVLLNSQDDILWSTNASNISSNTTAKLLNTGNLVLQENATGRILWQSFQHPTNAFLEGMELSTGNISGVQRTKLTSWKSHEDASIGEFSMSLERLNIPEVLVWRGSQPHWRSGPWNGQIFLGIPDMATNYLFGFYLSQDNGNTNYYLAYNYGNQTFPVYYLLSVDGNVYQVSWDPEKRDWYISWLAISSECDVYGKCGEFGICDHRSTPICRCLRGYKPRNDEEWSKQNWSSGCVRKEPFQCESESVKNNKEDGFVKMQNAKVPASILSYAAEDDCKAECLGNCSCTAYAYDAGTGCMSWIGSLIDLQIFSTGGTDLYIRVPYAELGEDKKNVTVVIAVSVIVGTTIILTCAYIFWKRIQIRERVKNKLRREDNDLVKLPELSQFEFERLVAATNNFNLSNKLGEGGYGPVYKGTLEDGQEIAVKRLSRSSGQGYEEFMNEVMVISKLQHRNLVRLFGCCIEGEEKILIYEYMPNKSLDAYMFDQSNQILNWEKRFSIIDGIARGLLYLHRDSRLRIIHRDLKLSNILLDEELNPKIADFGLAKIFSRTEDAVNTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIVSRRKNTSFCEDSKSLSLLGFAWNLWNADNTASLIDPEISSSCNKEDIMRCIHIGLLCVQELARDRPTMTAVVSMLNSETVNLPSPKQPAFVQRQTLLDIESSMTNDGFCSINNVSLTNVQGR* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0563 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 223 IPR036426 -
Ahy20g0563 820 Pfam Protein tyrosine and serine/threonine kinase 504 773 IPR001245 GO:0004672|GO:0006468
Ahy20g0563 820 Pfam Domain of unknown function (DUF3403) 775 820 IPR021820 GO:0004674
Ahy20g0563 820 Gene3D - 27 155 IPR036426 -
Ahy20g0563 820 SMART ntp_6 356 427 IPR003609 -
Ahy20g0563 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Ahy20g0563 820 Gene3D Transferase(Phosphotransferase) domain 1 579 785 - -
Ahy20g0563 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 15 811 - -
Ahy20g0563 820 ProSiteProfiles PAN/Apple domain profile. 348 428 IPR003609 -
Ahy20g0563 820 ProSiteProfiles Bulb-type lectin domain profile. 31 154 IPR001480 -
Ahy20g0563 820 CDD B_lectin 37 157 IPR001480 -
Ahy20g0563 820 CDD STKc_IRAK 509 774 - -
Ahy20g0563 820 CDD PAN_AP_plant 354 428 - -
Ahy20g0563 820 SMART blect_4 37 157 IPR001480 -
Ahy20g0563 820 Pfam PAN-like domain 355 413 IPR003609 -
Ahy20g0563 820 ProSiteProfiles Protein kinase domain profile. 503 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0563 820 Gene3D Phosphorylase Kinase; domain 1 464 578 - -
Ahy20g0563 820 Pfam D-mannose binding lectin 78 184 IPR001480 -
Ahy20g0563 820 Pfam S-locus glycoprotein domain 216 326 IPR000858 GO:0048544
Ahy20g0563 820 SMART serkin_6 503 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0563 820 SUPERFAMILY Protein kinase-like (PK-like) 489 799 IPR011009 -
Ahy20g0563 820 PIRSF SRK 4 820 IPR024171 GO:0004674
Ahy20g0563 820 PANTHER - 15 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0563 Ahy-Chr20 5896337 5900022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0563 438 788 Receptor kinase-like Gene Family AT4G23230 53.693 4.61e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g0563 PK_Tyr_Ser-Thr 7.40E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0563 - - ahf:112714694 1296.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0563 20 5896337 5900022 Ahy10g0370 10 3399235 3410488 hybridization