Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0562 ATGATGCTTATGGGGTCACTGGTTTTGCTACTAGCACTTTTTTCCACTTGCACTTCCTTGGACACCATCTCCTCTTCCTACATCCTTAATGCCTCCGAAACTTTAAGCTCCAGTAATGGTTTGTTCCACCTTGGATTTTTCACCCCTACTAACTCATCAACCTTTTCATCCTACCTCGGTATCTGGTTCATGACCAAACCCTCTGTCGTATGGGTTGCCAACAGGAACCAACCAATAACTGATTCTTCATCTTCTGGGCTGCTCAAGATATCAAAGGATGGAAACCTTGTTGTGACGAACTCAAAAAGTGTGGTCCTTTGGTCAACAAAGGCCTCCAATATTTCATCTAACACATTAGCTAAGCTTCAAAACAACGGCAACCTTGTGTTGCAAGAAAACTCCACAGGAAGGATCCTGTGGCAGAGTTTCCAACACCCCACAAACACTTTCCTGCAGGGAATGGAACTCGGTACCGGTAACATTAGCGGGGAGAGAATAAAACTGACTTCGTGGAGAAGCCTCCAGGATCCATCCATTGGAGAATTCTCAGTGAGTCTTGAACACCTGAATATCCCGGAAGTGATGATATGGAGAGGGAGCCAACCTCACTGGCGCAGTGGTCCATGGAATAGTCAAAAGTTTCTTGGCATACCTGACATGAGAAGCAACTTTCTTTCAGGGTTTTACTTAGGTGTGGAAGACATGGATAATGGAATTACTAATTACTATCTTGCTTACAACTACTCAAACAATCCTGATTCTGTATACTACTACATGTTGAGTGCTGATGGAAACCTACATGAAACATATTGGGATCATGAAAAGGGAGAATGGCTCGACTCGTGGTTAGCTATAAATTCAGAGTGTGATGTGTATGGCAAGTGTGGAGAGTTTGGAATTTGTGATTCTACTAGATCTCCGATTTGCAGCTGTTTGAGAGGGTATAAGCCAAGGAATCCTGAGGAGTGGAATAAACAGAACTGGAGCAGAGGTTGTGTTAGGAAGGAACCTTTTCAGTGTGAGAATGATGGATTTGTGAAGTTGCAGAATGCCAAGGTTCCAGCCTCTATCAAGTGGTCGTCTACCGCGATTGGAAACGACTGCAGAGGCCAGTGCTTGGGGAACTGCTCCTGCACAGCATATGCATATGATGCTGGCACTGGTTGTATGGTGTGGACTGCAAACTTAACTGACATACAAAGCTTCTCAGCTGGAGGAATTGATCTTTACATTCGAGTTCCCAATTCAGAGCTTGGTGAAGACAAGAAAAATGTCACAGTGGTCATTGCAGTGCCAGTCATAGTAGGAGCCGCTATCATTCTCATCTGTGCTTATATCTTCTGGAAAAGGATTCAAATCAGAGAGAAAGCGAAAAACAATGACCTAGTGAAATTCCCAGAGCTTTCCCAATTTGAGTTTAAAAGACTTGTTGCTGCAACAAATAACTTTAATCTATCAAATAAGCTAGGGGAAGGAGGTTATGGCCCAGTATATAAGGGAACATTGGAAGATGGACAGGAAATAGCAGTTAAAAGGCTTTCAAGATCGTCCGGGCAAGGATACGAAGAATTTATGAATGAGGTTATGGTAATATCAAAGCTTCAACATTTTAATCTCGTTAGACTTTTTGGATGTTGTATAGAAGGAGATGAGAAGATTTTGATCTATGAGTACATGCCAAACAAAAGTCTAGATGCATATATGTTCGATCAATCACAAATACTGAATTGGGAAAAACGTTTCAGTATAATTGAAGGAATAGCAAGGGGCTTGCTTTACCTTCACAGAGATTCTAGACTAAGAATTATACATAGAGATTTAAAGATGAGTAACATATTACTTGATGAAGAGCTAAATCCAAAAATTGCCGATTTTGGCATGGCAAAGATTTTTACACGGACTCAAGATGTGGTCAATACTAGAAGGGTTGTTGGAACATACGGTTATATGTCACCAGAATACGTTATACAAGGACTATTTTCGGAAAAGTCTGATGTATTTAGCTTTGGTGTTTTACTGCTGGAAATTGTTAGTAAGAGAAAAAATAGCAGCTTTTATGAAGATGCTGAATCTTTGAATCTTTTAGGATTTGCATGGAATTTATGGAATGCAGATAACATTGCATCTCTTATAGATCCAGAAATATCAAGCTCATGCAACAAAGAAGATATAATGAGGTGCATACATATTGGTCTTTTATGTGTACAAGAGCTTGCAAGAGATAGGCCTACAATGACTTCAGTGATTTCAATGCTTAAAAGTGAGACAATCAATCTTCCTCCTCCAAAACAGCCAGCATTCATTCTAAGGCAGACTATACTTGATATAGAATCTTCTCTTACAAATAAGGAATTAGGTTCTATCAATAATGTGACCATAACAAATATTCAAGGAAGATAA 2400 0.4008 MMLMGSLVLLLALFSTCTSLDTISSSYILNASETLSSSNGLFHLGFFTPTNSSTFSSYLGIWFMTKPSVVWVANRNQPITDSSSSGLLKISKDGNLVVTNSKSVVLWSTKASNISSNTLAKLQNNGNLVLQENSTGRILWQSFQHPTNTFLQGMELGTGNISGERIKLTSWRSLQDPSIGEFSVSLEHLNIPEVMIWRGSQPHWRSGPWNSQKFLGIPDMRSNFLSGFYLGVEDMDNGITNYYLAYNYSNNPDSVYYYMLSADGNLHETYWDHEKGEWLDSWLAINSECDVYGKCGEFGICDSTRSPICSCLRGYKPRNPEEWNKQNWSRGCVRKEPFQCENDGFVKLQNAKVPASIKWSSTAIGNDCRGQCLGNCSCTAYAYDAGTGCMVWTANLTDIQSFSAGGIDLYIRVPNSELGEDKKNVTVVIAVPVIVGAAIILICAYIFWKRIQIREKAKNNDLVKFPELSQFEFKRLVAATNNFNLSNKLGEGGYGPVYKGTLEDGQEIAVKRLSRSSGQGYEEFMNEVMVISKLQHFNLVRLFGCCIEGDEKILIYEYMPNKSLDAYMFDQSQILNWEKRFSIIEGIARGLLYLHRDSRLRIIHRDLKMSNILLDEELNPKIADFGMAKIFTRTQDVVNTRRVVGTYGYMSPEYVIQGLFSEKSDVFSFGVLLLEIVSKRKNSSFYEDAESLNLLGFAWNLWNADNIASLIDPEISSSCNKEDIMRCIHIGLLCVQELARDRPTMTSVISMLKSETINLPPPKQPAFILRQTILDIESSLTNKELGSINNVTITNIQGR* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0562 799 Pfam Protein tyrosine and serine/threonine kinase 484 752 IPR001245 GO:0004672|GO:0006468
Ahy20g0562 799 Gene3D Transferase(Phosphotransferase) domain 1 559 759 - -
Ahy20g0562 799 CDD B_lectin 26 146 IPR001480 -
Ahy20g0562 799 SMART serkin_6 483 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0562 799 PANTHER - 8 789 - -
Ahy20g0562 799 PIRSF SRK 1 799 IPR024171 GO:0004674
Ahy20g0562 799 ProSiteProfiles PAN/Apple domain profile. 340 414 IPR003609 -
Ahy20g0562 799 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Ahy20g0562 799 ProSiteProfiles Protein kinase domain profile. 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0562 799 Pfam D-mannose binding lectin 69 172 IPR001480 -
Ahy20g0562 799 CDD STKc_IRAK 489 753 - -
Ahy20g0562 799 ProSiteProfiles Bulb-type lectin domain profile. 20 143 IPR001480 -
Ahy20g0562 799 Pfam PAN-like domain 340 399 IPR003609 -
Ahy20g0562 799 SMART ntp_6 340 413 IPR003609 -
Ahy20g0562 799 SUPERFAMILY Protein kinase-like (PK-like) 469 776 IPR011009 -
Ahy20g0562 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Ahy20g0562 799 Gene3D Phosphorylase Kinase; domain 1 446 558 - -
Ahy20g0562 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 210 IPR036426 -
Ahy20g0562 799 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 8 789 - -
Ahy20g0562 799 CDD PAN_AP_plant 337 414 - -
Ahy20g0562 799 Pfam Domain of unknown function (DUF3403) 754 799 IPR021820 GO:0004674
Ahy20g0562 799 SMART blect_4 26 146 IPR001480 -
Ahy20g0562 799 Gene3D - 16 144 IPR036426 -
Ahy20g0562 799 Pfam S-locus glycoprotein domain 204 318 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0562 Ahy-Chr20 5866907 5870637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0562 424 767 Receptor kinase-like Gene Family AT4G23230 54.441 1.28e-125 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g0562 PK_Tyr_Ser-Thr 7.80E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0562 - - ahf:112714694 1562.74