Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0558 ATGAGTGGCAAAGATGAAGAGAGCAACGGCACTTACTATCTTTCTTATAGCTATGCAAATCATAATCTAAGGATGTTCGCGTTGGGTGTTGATGGAAACTTAAATGAATACTACTGGGATTATTCAAAGAAGCAATGGTCCATGATGTGGTCTGCTATCAACACTGAGTGCGGTGTTTATGGCAAGTGTGGAGTATTTGCAAGTTGCGACCCTAAAACTTCACCTATCTGCACTTGTTTGAGAGGGTATGTTCCAAGGAATGTAGAGGAGTGGAACAAACAAAACTGGAGCAGCGGCTGTGTTAGGAAGACACCTGTGCAGTGTGAGAGTGAGAAAGTCATAAAAAATAATAGTAGTGTTGAATCGGTAGCAGTAGAAGATGGGTTTGTGAAGCTTCAGAATACCAAGGTTCCAGACTATGCTGAGTGGTTGTCTTCCATTGACTTTGACTGCAGAACTGCGTGTTTGGGAAACTGCTCTTGCAAAGCGTATGCTTATGATGTTGGAATTGGTTGTATGCTGTGGAGTGGAAACTTGATTGACATACAGAGATTCTCAATGGGAGGAACCGATCTTTATATACGTGTTCCCTCTTCTGAGCTTGATGAGCAGAAGAAGAAAAATCATGCCGCAGTGATCATTGCAGTTACAGTCTCAGTAGCAGGAACTATTGGGATTGTGATTTGCGCGTTTATCCTGTGGAAAAGAAGAACTGCAATGGGAGGTGATGTATCATTCTTTCTGATGTTCGCGTTGGGTGTTGATGGAAACTTAAATGAATACTACTGGGATTATTCAAAGAAGCAATGGTCCATGATGTGGTCTGTTATTAACACTGAGTGCGGTGTTTATGGCAAGTGTGGAGTATTTGCAAGTTGCGACCCTAAAACTTCACCTATCTGCACTTGTTTGAGAGGGTATGTTCCAAGGAATGTAGAGGAGTGGAACAAACAAAACTGGAGCAGCGGCTGTGTTAGGAAGACACCTGTGCAGTGTGAGAGTGAGAAAGTCATAAAAAATAATAGTAGTGTTGAATCGGTAGCAGTAGAAGATGGGTTTGTGAAGCTTCAGAATACCAAGGTTCCAGACTATGCTGAGTGGTTGTCTTCCATTGACTTTGACTGCAGAACTGCGTGTTTGGGAAACTGCTCTTGCAAAGCGTATGCTTATGATGTTGGAATTGGTTGTATGCTGTGGAGTGGAAACTTGATTGACATACAGAGATTCTCAATGGGAGGAACCGATCTTTATATACGTGTTCCCTCTTCTGAGCTTGATGAGCAGAAGAAGAAAAATCATGCCGCAGTGATCATTGCAGTTACAGTCTCAGTAGCAGGAACTATTGGGATTGTGATTTGCGCGTTTATCCTGTGGAAAAGAAGAACTGCAATGGGAGGTGATGTATCATTCTTTCTGATGTTCGCGTTGGGTGTTGATGGAAACTTAAATGAATACTACTGGGATTATTCAAAGAAGCAATGGTCCATGATGTGGTCTGTTATTAACACTGAGTGCGGTGTTTATGGCAAGTGTGGAGTATTTGCAAGTTGCGACCCTAAAACTTCACCTATCTGCACTTGTTTGAGAGGGTATGTTCCAAGGAATGTAGAGGAGTGGAACAAACAAAACTGGAGCAGCGGCTGTGTTAGGAAGACACCTGTGCAGTGTGAGAGTGAGAAAGTCATAAAAAATAATAGTAGTGTTGAATCGGTAGCAGTAGAAGATGGGTTTGTGAAGCTTCAGAATACCAAGGTTCCAGACTATGCTGAGTGGTTGTCTTCCATTGACTTTGACTGCAGAACTGCGTGTTTGGGAAACTGCTCTTGCAAAGCGTATGCTTATGATGTTGGAATTGGTTGTATGCTGTGGAGTGGAAACTTGATTGACATACAGAGATTCTCAATGGGAGGAACCGATCTTTATATACGTGTTCCCTCTTCTGAGCTTGATGAGCAGAAGAAGAAAAATCATGCCGCAGTGATCATTGCAGTTACAGTCTCAGTAGCAGGAACTATTGGGATTGTGATTTGCGCGTTTATCCTGTGGAAAAGAAGAACTGCAATGGGAGGTGATGTATCATTCTTTCTGATGTTCGCGTTGGGTGTTGATGGAAACTTAAATGAATACTACTGGGATTATTCAAAGAAGCAATGGTCCATGATGTGGTCTGTTATTAACACTGAGTGCGGTGTTTATGGCAAGTGTGGAGTATTTGCAAGTTGCGACCCTAAAACTTCACCTATCTGCACTTGTTTGAGAGGGTATGTTCCAAGGAATGTAGAGGAGTGGAACAAACAAAACTGGAGCAGCGGCTGTGTTAGGAAGACACCTGTGCAGTGTGAGAGTGAGAAAGTCATAAAAAATAATAGTAGTGTTGAATCGGTAGCAGTAGAAGATGGGTTTGTGAAGCTTCAGAATACCAAGGTTCCAGACTATGCTGAGTGGTTGTCTTCCATTGACTTTGACTGCAGAACTGCGTGTTTGGGAAACTGCTCTTGCAAAGCGTATGCTTATGATGTTGGAATTGGTTGTATGCTGTGGAGTGGAAACTTGATTGACATACAGAGATTCTCAATGGGAGGAACCGATCTTTATATACGTGTTCCCTCTTCTGAGCTTGATGAGCAGAAGAAGAAAAATCATGCCGCAGTGATCATTGCAGTTACAGTCTCAGTAGCAGGAACTATTGGGATTGAAACTAATAAACAGAAAAAGGAACCCCTTCACTCCACGCCCTTCTCATCGGATACGAGACATTGTTACCCTTGGGCAGCTTGTGGGTGCACGCGCCACCTCCGTTACGGGACTTGCTATGCAGTGCGCAGCTGCAATTGCGGTAGTAGGGCCGGCGCTCCATGCAGTGGTCAAACCCAGAGATGCTCCCCTCAAAGATCGGCCGGAAAAGACCATCTGCTGCGGGCCGGAGGCCATGCCAAACAGCACCCGAACCAGGAAGGAAAAATATGTGTTGCCTTTAGCACTGGCTTCCTTCCTTGGTTGTTATCGCTTCTCCTGCAACGGGGCGGATCAATCAACATGCAGAGTTCATCGGCCTTTGCTACGGAGGGAGACTGCAGTGGCGTCGGTGCAGCCGGCGGGGGTGCAGCGGCGAGAACCATGACGGCAAAGATGCGTATTAGAGGTTACGAGAGAGCAAATTTCAGACTACCTACAATAAGCAACACAAAATACCCAAGCAAAGTTAAACTCCCGGAGCTTTCCCAATTTGAGTTTGAAAAGCTTGCAATTGCAACAGATAACTTTCACTTAGCTAATAAGCTGGGGCAAGGAGGATTTGGACTAGTATATAGGGGAACATTGGAAGATGGACTAGAAGTAGCAGTTAAAAGACTTTCAAGAGCATCATGTCAAGGATTAGAAGAATTTATGAATGAGGTTCTAGTAATATCAAAACTTCAGCACCGTAATCTTGTTAGACTTCTTGGATGTTGTGTAGAAGGAGATGAGAAGATTTTGGTGTATGAATACATGCCAAATAAAAGTTTAGATGCATATCTGTTTGATTCATGTAAGCAAGTATTAAATTGGGAAAAACGTTTTCATATTATCGAAGGAATAGCTCGAGGTTTACTTTATCTTCACAGAGACTCTCGACTAAGAATTATCCATAGAGATTTAAAGCCAAGCAATATATTACTTGATGAAGAGCTAAATCCAAAGATTTCAGATTTTGGTATGGCAAGGATTTTTTGCCACACTGAAAATGAGGCAAATACTATGAGAGTTGCTGGGACATATGGTTATATGTCACCGGAATATGCTATGGAAGGATTATTTTCAGAAAAGTCTGATGTATTCAGCTTTGGTGTTTTACTACTAGAGATTGTCAGCCGTAGAAAGAATACTAGATTTTATGAAGATGCAGAATCTTTGAGTCTTTTAGGATTTGCATGGAAACTGTGGAATGCTGATAACATTCCACCTCTGACAGATCCAGATATATCAAATCTGAGCTGCAATGAAGATATAAAGAGGTGCATACATATTGGTCTTTTGTGTGTACAAGAACTTGCAAGAGATAGGCCTACAATAACTGCAGTGGTTTCAATGCTTAATAGTGAGACTGTTAATCTTCCTTCTCCCAAGCAGCCAGCATTCGTTCAGAGGCAGACTCTGCTGGATATAGAGTCTTCTATGACAAGTGATGGATTATGCTCCATTAATAATGTGAGCCTAACAAATGTCCAAGGAAGATAA 4218 0.4251 MSGKDEESNGTYYLSYSYANHNLRMFALGVDGNLNEYYWDYSKKQWSMMWSAINTECGVYGKCGVFASCDPKTSPICTCLRGYVPRNVEEWNKQNWSSGCVRKTPVQCESEKVIKNNSSVESVAVEDGFVKLQNTKVPDYAEWLSSIDFDCRTACLGNCSCKAYAYDVGIGCMLWSGNLIDIQRFSMGGTDLYIRVPSSELDEQKKKNHAAVIIAVTVSVAGTIGIVICAFILWKRRTAMGGDVSFFLMFALGVDGNLNEYYWDYSKKQWSMMWSVINTECGVYGKCGVFASCDPKTSPICTCLRGYVPRNVEEWNKQNWSSGCVRKTPVQCESEKVIKNNSSVESVAVEDGFVKLQNTKVPDYAEWLSSIDFDCRTACLGNCSCKAYAYDVGIGCMLWSGNLIDIQRFSMGGTDLYIRVPSSELDEQKKKNHAAVIIAVTVSVAGTIGIVICAFILWKRRTAMGGDVSFFLMFALGVDGNLNEYYWDYSKKQWSMMWSVINTECGVYGKCGVFASCDPKTSPICTCLRGYVPRNVEEWNKQNWSSGCVRKTPVQCESEKVIKNNSSVESVAVEDGFVKLQNTKVPDYAEWLSSIDFDCRTACLGNCSCKAYAYDVGIGCMLWSGNLIDIQRFSMGGTDLYIRVPSSELDEQKKKNHAAVIIAVTVSVAGTIGIVICAFILWKRRTAMGGDVSFFLMFALGVDGNLNEYYWDYSKKQWSMMWSVINTECGVYGKCGVFASCDPKTSPICTCLRGYVPRNVEEWNKQNWSSGCVRKTPVQCESEKVIKNNSSVESVAVEDGFVKLQNTKVPDYAEWLSSIDFDCRTACLGNCSCKAYAYDVGIGCMLWSGNLIDIQRFSMGGTDLYIRVPSSELDEQKKKNHAAVIIAVTVSVAGTIGIETNKQKKEPLHSTPFSSDTRHCYPWAACGCTRHLRYGTCYAVRSCNCGSRAGAPCSGQTQRCSPQRSAGKDHLLRAGGHAKQHPNQEGKICVAFSTGFLPWLLSLLLQRGGSINMQSSSAFATEGDCSGVGAAGGGAAARTMTAKMRIRGYERANFRLPTISNTKYPSKVKLPELSQFEFEKLAIATDNFHLANKLGQGGFGLVYRGTLEDGLEVAVKRLSRASCQGLEEFMNEVLVISKLQHRNLVRLLGCCVEGDEKILVYEYMPNKSLDAYLFDSCKQVLNWEKRFHIIEGIARGLLYLHRDSRLRIIHRDLKPSNILLDEELNPKISDFGMARIFCHTENEANTMRVAGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIVSRRKNTRFYEDAESLSLLGFAWKLWNADNIPPLTDPDISNLSCNEDIKRCIHIGLLCVQELARDRPTITAVVSMLNSETVNLPSPKQPAFVQRQTLLDIESSMTSDGLCSINNVSLTNVQGR* 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0558 1405 PANTHER - 467 683 - -
Ahy20g0558 1405 PANTHER - 243 459 - -
Ahy20g0558 1405 ProSitePatterns Protein kinases ATP-binding region signature. 1094 1116 IPR017441 GO:0005524
Ahy20g0558 1405 ProSiteProfiles PAN/Apple domain profile. 108 197 IPR003609 -
Ahy20g0558 1405 PANTHER - 5 235 - -
Ahy20g0558 1405 Pfam PAN-like domain 126 182 IPR003609 -
Ahy20g0558 1405 Pfam PAN-like domain 350 406 IPR003609 -
Ahy20g0558 1405 Pfam PAN-like domain 574 630 IPR003609 -
Ahy20g0558 1405 Pfam PAN-like domain 798 854 IPR003609 -
Ahy20g0558 1405 SMART egf_5 728 773 IPR000742 -
Ahy20g0558 1405 SMART egf_5 504 549 IPR000742 -
Ahy20g0558 1405 SMART egf_5 280 325 IPR000742 -
Ahy20g0558 1405 SMART egf_5 56 101 IPR000742 -
Ahy20g0558 1405 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 467 683 - -
Ahy20g0558 1405 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 243 459 - -
Ahy20g0558 1405 Gene3D Phosphorylase Kinase; domain 1 1062 1163 - -
Ahy20g0558 1405 SUPERFAMILY Protein kinase-like (PK-like) 1074 1388 IPR011009 -
Ahy20g0558 1405 CDD PAN_AP_plant 776 869 - -
Ahy20g0558 1405 ProSiteProfiles PAN/Apple domain profile. 332 421 IPR003609 -
Ahy20g0558 1405 PANTHER - 691 1396 - -
Ahy20g0558 1405 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 5 235 - -
Ahy20g0558 1405 CDD STKc_IRAK 1094 1359 - -
Ahy20g0558 1405 CDD PAN_AP_plant 104 197 - -
Ahy20g0558 1405 ProSiteProfiles PAN/Apple domain profile. 780 869 IPR003609 -
Ahy20g0558 1405 SMART serkin_6 1088 1351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0558 1405 CDD PAN_AP_plant 552 645 - -
Ahy20g0558 1405 Gene3D Transferase(Phosphotransferase) domain 1 1164 1370 - -
Ahy20g0558 1405 CDD PAN_AP_plant 328 421 - -
Ahy20g0558 1405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1208 1220 IPR008271 GO:0004672|GO:0006468
Ahy20g0558 1405 Pfam Protein tyrosine and serine/threonine kinase 1089 1356 IPR001245 GO:0004672|GO:0006468
Ahy20g0558 1405 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 691 1396 - -
Ahy20g0558 1405 ProSiteProfiles PAN/Apple domain profile. 556 645 IPR003609 -
Ahy20g0558 1405 Pfam S-locus glycoprotein domain 247 310 IPR000858 GO:0048544
Ahy20g0558 1405 Pfam S-locus glycoprotein domain 7 86 IPR000858 GO:0048544
Ahy20g0558 1405 Pfam S-locus glycoprotein domain 695 758 IPR000858 GO:0048544
Ahy20g0558 1405 Pfam S-locus glycoprotein domain 471 534 IPR000858 GO:0048544
Ahy20g0558 1405 SMART ntp_6 124 196 IPR003609 -
Ahy20g0558 1405 SMART ntp_6 796 868 IPR003609 -
Ahy20g0558 1405 SMART ntp_6 572 644 IPR003609 -
Ahy20g0558 1405 SMART ntp_6 348 420 IPR003609 -
Ahy20g0558 1405 ProSiteProfiles Protein kinase domain profile. 1088 1373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0558 1405 Pfam Domain of unknown function (DUF3403) 1360 1405 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0558 Ahy-Chr20 5792472 5798523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0558 1075 1405 Receptor kinase-like Gene Family AT3G45860 55.882 6.37e-115 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy20g0558 PK_Tyr_Ser-Thr 2.10E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0558 - - ahf:112785328 2892.83