Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0549 ATGGAGTTTGATCTTGAAGACCCTTTATCCTGCTTCAAGGAACAACAAGCTTATACCATAACAGAACTCTTTGCTTCTGAATCTGATCACATGCCGGCCCCAAACTACTTGAATTCAACACATTTTCGCGCTTCCTTTCGTTGCGAAGCCATTTCTCTCATACTTCAGGTCCAGTTTTCATGCAATTTGGACCCTTATGTAGCTTATCTAGCTATAAATTACTTGCATCGCTTCATGTCGAGGCAAGAAATTCCGATGGAGAAGCCATGGTTACTGAAACTTGTTGTCATATCCTGCCTTTCTCTTGCTTCAAAGATGAAGAACACACCCTTATCAATTTCTGATATACAGATAGAAGGTTGCATCTTTGAGTCTCAAACTGTTCGGAAGATGGAGCTTCTTATTCTTGGCGCTCTGGAATGGCGTATGAGGTCAATTACACCTTTTCCTTTCTTGCATTTCTTCATCTCTTCAACAGAACTCAAAGATCCATCACTGAAGCAAGTGCTTAAAGAGCAAGCTACAAAGATAATCTTCAATGCTCACAATGACATTAAGCTTTTAGAGTATAAACCTTCAACTATTGCAGCATCTGCTCTTATCTCTGCATCTCGCGAACTATGTCCGCAGCAATATACTATGCTGAGAGCTTCAATTGCAGCTTGTGAGAATCTAGATGAGGATTCATTGACCAAGTGCATTGACCTGATGCAAGAGATGGTTATGTGGACGGAAGCGAACGAGTCAACCATCGATACAAGCTTTCTAAGCACTGAAACTCCGGTGAGCGTGCTGGAGAGAAGCATCAAGCGGCGGAGAATCTAA 825 0.4194 MEFDLEDPLSCFKEQQAYTITELFASESDHMPAPNYLNSTHFRASFRCEAISLILQVQFSCNLDPYVAYLAINYLHRFMSRQEIPMEKPWLLKLVVISCLSLASKMKNTPLSISDIQIEGCIFESQTVRKMELLILGALEWRMRSITPFPFLHFFISSTELKDPSLKQVLKEQATKIIFNAHNDIKLLEYKPSTIAASALISASRELCPQQYTMLRASIAACENLDEDSLTKCIDLMQEMVMWTEANESTIDTSFLSTETPVSVLERSIKRRRI* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0549 274 PIRSF Cyclin_A_B_D_E 21 267 IPR039361 -
Ahy20g0549 274 SMART cyclin_7 52 137 IPR013763 -
Ahy20g0549 274 Gene3D - 33 144 - -
Ahy20g0549 274 PANTHER CYCLINS 5 272 IPR039361 -
Ahy20g0549 274 SMART Cyclin_C_2 146 268 IPR004367 -
Ahy20g0549 274 Pfam Cyclin, C-terminal domain 146 247 IPR004367 -
Ahy20g0549 274 CDD CYCLIN 47 136 IPR013763 -
Ahy20g0549 274 SUPERFAMILY Cyclin-like 11 143 IPR036915 -
Ahy20g0549 274 Pfam Cyclin, N-terminal domain 21 143 IPR006671 -
Ahy20g0549 274 Gene3D - 22 235 - -
Ahy20g0549 274 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 272 - -
Ahy20g0549 274 SUPERFAMILY Cyclin-like 127 245 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0549 Ahy-Chr20 5732301 5734498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0549 1 267 Core Cell Cycle Gene Families AT4G03270 44.128 6.32e-66 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0549 K18812 - gmx:100799985 376.326