Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0548 ATGGATAGCGCGGGTGCACCAGCGCCGGCGCCGGCACCGGCAGCGGCGTTTAACGAATCGGACAAATCAATGATTTGCTACATACCAACGATGACAACAACAAATGGTGTATGGCAGCAGGGTCTTAACCCTTTACGTTACGCCCTCCCTCTCTTCGTCGTCCAGTTAACCTTAGTTGTTCTTGCCACACGTCTCTTCTATTTCATCCTCAGACCCTTTCACCAACCCCGCGTCATCGCCGAGGTTTTGGGTGGATTGTTGTTAGGGCCATCGGTGCTAGGTCAAATCGACGGTTTTGGGACTAGGGTTTTCCCTTTGAGAAGTATGTTGATGCTTGAGACAATGGCCAACATTGGCCTCATATACTTCATGTTCCTCATAGGGTTAGAGATGGACATGGATGTGATGAAGCGCACGGGCAAGAAGGCGGTTTCTATAGCCATTGCCGGCATGATTTTGCCCTTCGTGGTGGGTTTCACTCTCTCTCACATCGTGGAACACATCCACACGAGCATGGAATCGGATACTACCCGTATCAGCTATATCATATACCTTGGTGTTGTGCTATCTGTGACTGCATTCCCTGTGCTTGTTAGAATGCTGGCTGATCTTAAGCTTGTTAACACGGAGCTTGGCAAGCTTGCAATCTCAACTTCTTTGATTAATGACATGTGTGCTTGGGCTTTGTTAGTTGTAGGCATTGCCTTGTCAGAGAGGAAAGCTCGTTATTCTTATGCTTCTCTCTGGGTTCTCTTGTCAAGTCTTGCATTTGTTGTTGTTTGCATTCTTGTTATTAGGCCTCTGGTGTCATGGATGATACATAAAACCCCAGAGGGACAACCCTTCAGTGAAATACAGATATGCATTGTGCTTACTGGTGTTATGATCTCTGCTTTTATCACTGATGCACTTGGGACACATGCTGTGTTTGGTGCATTTGTCTATGGTTTGGTTATTCCAAATGGACCACTTGCTGCTGCTATCATTGAGAAGCTTGAGGACTTTGTTTCAGGCCTTCTGCTACCTCTCTTCTTTGCTATCAGTGGCCTCAAGACTAATCTCACCTTGATCAAGGGAGCCGCTAGATGGGGATTTGTGATCTTGATGGTTCCTCTTACTTGTATTGGCAAGGTTCTTGGTACTCTTGTTGTTTCTCTCCTATTCCAAATACCTGTCAGGGAAGGTGTAATTCTTGGTCTGCTTATGAATACTAAAGGCTTCATTGAAATTATAGTGCTCAACGTTGGCTGGGAACAAAAGGTATTGGGAGATGAAGTATTTTCAATCATGGTTCTTGTAACAATTCTGATGACAGCAATCATTTCACCCACAGTGGCATTGATCCATAAGCCAAGAAAAAGGCACATATCATACAAGAACAGAACAATGCAAAGTACTGGAACAGATGCAGAGCTAAGAATCCTTGTTTGCATTCACGTCCCTAGAAATGTCCCAACCATAATCAACCTCCTCGAAGCAACCCACCCCACAATAAAATCCCCCATTACCGCAAACGTCCTCCACCTGGTTGAACTCACCGGCAGAGCCTCCGCCATGCTGGTTGTCCACAACACCACCGACAAAAAATCAGGCCGCCCCGTTAACAAGACACAAGCACAAACAGAGCAGATCATCACAGCATTCCGTAACTTCGAAGAAAACGTGGACTGCGTCTCGGTTCAGCCACTGACTGTGATCTCCCCGTACCCCACCATGCATGAAGACATTTGCAGCATTGCAGAAGACAAAAGAGTGTCTTTCATTATCATCCCTTTCCACAAACAACAAACGGTTGCCGGAGAGATGGAAGACACCATCCCTGCGTTTAGGCTGGTGAACCACAATCTCATGCAAACCGCTCCCTGCTCCGTTGGGATCCTCGTGGATCGAGGCCTCAACGGATCCACAAGATTAGCCGCCAGGCCCACGTGTCATCAGGTGACCGTCTTGTTCTTCGGAGGACCCGACGACAGAGAAGCTCTTTCCTTTGGGTGGAGAATGTCAAGGCACCCCAGGGTTCGCCTCACCGTCATGCATTTTGTTCCTAGTAAAGATCTTACAGTTAGCAATAACGAAGAAGATGATGCTCAAGGAACCGAGAGAGATAATTATAGCAATAATAATGATAACTTGCTAGATGAAGAGATCATGTACGAGTTAAGGTTGATAGCAGAACATGATGATTCTGTTGAGTACTTAGAAAGAGTTGTAGGGAACGGAGAGGAGACAGTAGGGGCAATAAGGGCAATGAAGAATGTGAATGATTTGTTCATAGTTGGGAGAGGGCAAGGGGCATCACCATTAACAGAAGGGTTGACGGATTGGAGTGAGTGCCCGGAGTTGGGTGCCATAGGGGACTTGTTGGCTTCTTCAGACTTTGAAACATCTGCTTCGGTGCTTGTGGTGCTCCAGTATGTTGGGGAAGGTCCAGAAGGAGAACAAGTCATGGTCACTCAAAAGCCATGGCTTGCAACTCATGATTTCTACCGAAGCTTGATCAACAGACGTATGTCAAGAAGAAGATATGGATCCGAATCACCAGCTATGTATTAA 2553 0.4653 MDSAGAPAPAPAPAAAFNESDKSMICYIPTMTTTNGVWQQGLNPLRYALPLFVVQLTLVVLATRLFYFILRPFHQPRVIAEVLGGLLLGPSVLGQIDGFGTRVFPLRSMLMLETMANIGLIYFMFLIGLEMDMDVMKRTGKKAVSIAIAGMILPFVVGFTLSHIVEHIHTSMESDTTRISYIIYLGVVLSVTAFPVLVRMLADLKLVNTELGKLAISTSLINDMCAWALLVVGIALSERKARYSYASLWVLLSSLAFVVVCILVIRPLVSWMIHKTPEGQPFSEIQICIVLTGVMISAFITDALGTHAVFGAFVYGLVIPNGPLAAAIIEKLEDFVSGLLLPLFFAISGLKTNLTLIKGAARWGFVILMVPLTCIGKVLGTLVVSLLFQIPVREGVILGLLMNTKGFIEIIVLNVGWEQKVLGDEVFSIMVLVTILMTAIISPTVALIHKPRKRHISYKNRTMQSTGTDAELRILVCIHVPRNVPTIINLLEATHPTIKSPITANVLHLVELTGRASAMLVVHNTTDKKSGRPVNKTQAQTEQIITAFRNFEENVDCVSVQPLTVISPYPTMHEDICSIAEDKRVSFIIIPFHKQQTVAGEMEDTIPAFRLVNHNLMQTAPCSVGILVDRGLNGSTRLAARPTCHQVTVLFFGGPDDREALSFGWRMSRHPRVRLTVMHFVPSKDLTVSNNEEDDAQGTERDNYSNNNDNLLDEEIMYELRLIAEHDDSVEYLERVVGNGEETVGAIRAMKNVNDLFIVGRGQGASPLTEGLTDWSECPELGAIGDLLASSDFETSASVLVVLQYVGEGPEGEQVMVTQKPWLATHDFYRSLINRRMSRRRYGSESPAMY* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0548 850 MobiDBLite consensus disorder prediction 686 708 - -
Ahy20g0548 850 PANTHER CATION/H+ EXCHANGER 3 19 833 - -
Ahy20g0548 850 PANTHER CATION/H + ANTIPORTER 19 833 - -
Ahy20g0548 850 Gene3D - 51 457 IPR038770 -
Ahy20g0548 850 Pfam Sodium/hydrogen exchanger family 58 445 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0548 Ahy-Chr20 5720023 5723131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0548 20 847 Antiporter Super Family AT2G13620 58.950 0.0 965
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0548 - - gmx:100800514 1090.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0548 20 5720023 5723131 Ahy10g0359 10 3299544 3302615 hybridization