Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0529 ATGCAAACGACGTACTTGGAGAGATCAAGGGAGAAGCGAAGTTTGGATTCAACCTCCGCTGATGAAGATGAACCTCAAAAGAAGAGACCTGCGTTGGCCAGTGTAATTGTTGAAGCCCTGAAGGTGGACTGTCTGCAGAAACTTTGTTCATCACTGGAGCCTATCCTACGTAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTAGCAAAACTAGGCACTGCCAAGCTTAGTGGGAGGACTTCTCCTAAGCAAATAGAAGGTCATGATGTTGGCAATTTACAATTACAATTCAAGACCAGGTTATCTCTTCCTCTCTTTACCGGTGGGAAAGTGGAGGGAGAGCAGGGCACAGCCATACATATTGTCCTGGTTGATGCAAGCACAGGCCATATTGTGACATCTGGTCCAGAGTCATGTGCAAAATTAGATGTTATTGTGCTTGAAGGGGATTTCAATAATGAGGATGATGATAATTGGAGTGAAGAAGAATTTGAGAGCCATGTTGTGAAAGAGCGAGAAGGAAAGAGACCTCTTTTGACTGGTGATCTGCAAGTGATACTGAAGGATGGTGTAGGTACATTGGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGGCTCAAAGTTTCCTCAGATTGTAATGAGGGAAAGCGTATTCGTGAAGCCAAAACAGAAGCTTTCACTGTTAAAGATCACCGGGGAGAATTATACAAGAAACACTATCCACCTGCCCTGAATGATGAGGTCTGGAGACTGGAGAAGATCGGCAAGGATGGGTCCTTTCACAAAAGGTTAAATAGAGCAGGAATATTTACTGTTGAAGATGTCCTTAGACTTGTGGTTAAAGACCCACAGAGGTTGCGAAATATTCTTGGGAGTGGCATGTCAAATAAAATGTGGGATGTCCTCGTTGAACATGCAAAGACTTGTGTTCTCAGCGGAAAACTTTATGTGTACTATCCTGATGATGCAAGGAGTGTTGGTGTTGTTTTCAATAACATCTACGAGTTGAGTGGCTTAATAGCTAATGATCAATACTACTCGGCTGATTCTCTCTCTGATAGTCAAAAAGTATATGTGGACACATTGGTGAAGATGGCATATGAAAATTGGATGCATGTAATTGAGTATGATGGCAAGTCTCTCCTAAATTACAATCAGAAGACATTGGGCACTGCTCAACTTCAACATTTAATGGATTCCCATAATTATTCAAATTCAAACTTGCTTGATCACCAGACCTCCTTCCCAAATTCACCTGTTCCTGTACCTACAAGGCAACCTTCGATGGATCCAGGAGTAACATTTGCAGGTTATCATGATAGTGCAGCTACTAGATTCTCAATGCAACCGCAGAATGCTAATCTTAATTCTTCAATTCAGTACGATAAGACAATGTTCCCACTACCAAACCAGATGATGAGTGCTTCACACCATGCTCAACTTCCAAGAAATGGTCCAACACAAATAGACACTCCTGGCTTACACACTAATGGCATTTCTAATCCTAGTTATAGAGGATATGAAGATTACTTTCCAGCGGAGGAGATTAGAAGCAGAAGTCACGAGATGCTAGAGAATGAAGATATGCAGCATCTGCTACGCATTTTTAATATGGGTGGCCAACCCCGCACTCCGTTAAATGCCGAAGATGGATACCCTTGTTTATCTAACTACATGCCTACAGACTCCATGAGCTACAACTTTGACAATGAGCAGAACCGTTCGTCAGGAAAGGCCGTCGTGGGCTGGCTAAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAAGGCAGCTGAGAGGCGGGCTCAGCTCGTTGAGTTGGATGACCTCTAG 1869 0.4318 MQTTYLERSREKRSLDSTSADEDEPQKKRPALASVIVEALKVDCLQKLCSSLEPILRRVVSEEVERALAKLGTAKLSGRTSPKQIEGHDVGNLQLQFKTRLSLPLFTGGKVEGEQGTAIHIVLVDASTGHIVTSGPESCAKLDVIVLEGDFNNEDDDNWSEEEFESHVVKEREGKRPLLTGDLQVILKDGVGTLGELTFTDNSSWIRSRKFRLGLKVSSDCNEGKRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNRAGIFTVEDVLRLVVKDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDARSVGVVFNNIYELSGLIANDQYYSADSLSDSQKVYVDTLVKMAYENWMHVIEYDGKSLLNYNQKTLGTAQLQHLMDSHNYSNSNLLDHQTSFPNSPVPVPTRQPSMDPGVTFAGYHDSAATRFSMQPQNANLNSSIQYDKTMFPLPNQMMSASHHAQLPRNGPTQIDTPGLHTNGISNPSYRGYEDYFPAEEIRSRSHEMLENEDMQHLLRIFNMGGQPRTPLNAEDGYPCLSNYMPTDSMSYNFDNEQNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDL* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0529 622 Pfam Calmodulin binding protein central domain 252 318 IPR046830 -
Ahy20g0529 622 PANTHER CALMODULIN-BINDING PROTEIN 6 620 - -
Ahy20g0529 622 Pfam Calmodulin binding protein-like N-terminal domain 93 240 IPR046831 -
Ahy20g0529 622 MobiDBLite consensus disorder prediction 1 28 - -
Ahy20g0529 622 Pfam Calmodulin binding protein C-terminal domain 323 385 IPR046829 -
Ahy20g0529 622 PANTHER OS02G0177800 PROTEIN 6 620 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0529 Ahy-Chr20 5451776 5456541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0529 1 621 Calmodulin-binding Proteins AT2G18750 59.877 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0529 - - gmx:100802994 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0529 20 5451776 5456541 Ahy10g0344 10 3141745 3146499 hybridization
Ahy3g2997 3 126802519 126807728 Ahy20g0529 20 5451776 5456541 PCT
Ahy20g0529 20 5451776 5456541 Ahy3g2997 3 126802519 126807728 PCT