Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0523 ATGACTCACGACGAACTCCAAATTGTTTCAGAAAAAACATCAGTGCAAAGTCATTTCGATATATCCAAGTTACGTATTAACCCTGACCTTGATGAGGTCAAAAAGTTTCGTAACAGGAGGCTTTCTAGCAAACCATCTAATTCGGCAAGGATTAGTCAAGTTTCATCCCGTGGTCCACGTTCTGGTGCAGACGAATTAAGAAATGGGGATGTCGTAGTCAAAACAATTGAAGAAGTTTTAAGCTCTACGCAGGAAGGACCTACATGGATTGCCGGTACTATTGTTTCGATCAATGCTGGGAAGGATGATTGGTTTTATAAATCCTGCCGAAAGTGTCCAAAGAAGGTAGACACCCCAATCGGCAACAGATATGAGTGTGAAAAATGTGGCCACACTCACGGTAGCGCATCATTTAGGTTCAAGGTTGAGGTAATGGTATATGATGGAACAGGAAGCTTGATGTTGCTGATGTGGGACAGGGAGACGGTACAATTTTGTGGGAGGCAAGCTGAGCAAATCAAGAATGAGGAAGTAATTCAAAACATTCATTAG 552 0.4221 MTHDELQIVSEKTSVQSHFDISKLRINPDLDEVKKFRNRRLSSKPSNSARISQVSSRGPRSGADELRNGDVVVKTIEEVLSSTQEGPTWIAGTIVSINAGKDDWFYKSCRKCPKKVDTPIGNRYECEKCGHTHGSASFRFKVEVMVYDGTGSLMLLMWDRETVQFCGRQAEQIKNEEVIQNIH* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0523 183 MobiDBLite consensus disorder prediction 39 66 - -
Ahy20g0523 183 Pfam Replication factor-A C terminal domain 92 175 IPR013955 -
Ahy20g0523 183 SUPERFAMILY Nucleic acid-binding proteins 73 175 IPR012340 -
Ahy20g0523 183 Gene3D - 57 182 IPR012340 -
Ahy20g0523 183 MobiDBLite consensus disorder prediction 42 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0523 Ahy-Chr20 5414151 5416431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0523 22 175 Core DNA Replication Machinery Family AT5G08020 24.841 4.13e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0523 - - aip:107623611 375.17