Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0517 ATGGCTATTAACATCGTTGGTGCGATCACGGGCGTTATGAGCTGCCTCTGTACACAGAACTGTCTTCAAGAATCACTTGGTCATCATATTAGACACCTTAGAAGACCCAAAAGGAATTTGAACAAGCTCAAGTCATTGTTGGAGGAGCTAGATGCCCGGAAAGTCGACATGTGTGCCAAGCTAAATCAAATGTGGCTTCAAAAAGGGATGAATCCAAAGAAAGAAGTGGAATTGTGGCTGAAAAATGTTGATGAGATTGCAAATGAAGTAAATAAGATCATAAGGGAAGTTGAACAAGAAAGTGGAAGCACAAGTGTTCTCTCTCCATTTTATTATAGTTCAAGAATAAAGAGAGGAGAACTTATTGAGAAAAAAATGGAGGAGGTGAGAGAGCTTCTAGAGAAAGGTCGATTTGCAGATGATTCATTGGCTGAAACTTCGCCTCGAAAAGGGCATACCCTTCCAACAACAAAGCTAATGGAACACGAAACAACAATGAAAAGCTTGAACAAGATTTTGAACTTCATATTGGATGATAGAGTGAGAATTATTGGTGTTCATGGGATGGGTGGAGTGGGGAAAACAACTATCATGGCTGAAATTAACAATAGACTATTGAGGGAAAATAGACTATTTGACAGTGTTATTTGGGTTAGTTCCTCAAAGGACATGAAAACTGAGGAGTTACAAAAGGTTATTGCAGGGAAGTTTGATATAGACCTTTCAGGATTTCAGGATGAGACTTCAAGAGCTGCCACACTGTTTGAAGCTTTCCAAAGAAGGAAGAATTTTGCCTTGATTCTGGATGATCTATGGGAGCCATTCTCTCTTGAAAGAGTTGGAATACCAATTCCAACTGTGGAGAACGGTTGCAAACTGCTAATAACTACTCGAAGGGTAAGCGTTTGCCGAGGCATGGAAACAGATAGAGATGTTAAAGTAAAGGCTCTTACAGAAAATGAAGCATGGGATCTCTTCAGGGACAAAGTTGGGGATGAAGCATTGGCCTCTCCGGACATCAAACTGATTGCAAAAGATGTGGCAAAAGAATGCATGGGATTGCCTCTTGGTATTGTTACCGTGGGGCGTGCCTTGAGAAATGCAACTGATAGTTCAGAGTGGCAGATTTCATTGATGGGGTTAAAAGCTTCAGCTCTCAACATAGAACAAATGGAAGAATCTGTTTTCTCTCGTTTGAAATTCAGCTTCACAAAATTGAAGGATGACACAAGTAGGTCCTGTTTTCTATATTGTGCTCTCTATCCTGAAGGTAATCATGTTGATGCAAATGCATTGATTGAGTATTGGATGTGGGAAGGTTTATTAGGTGCAGTGGATAGCATTTCAACAAGCAAACAGAAGGGGAAAATCATATTGAATGAACTAAAATATGCATGCTTGCTGGAAAATGCTGCAGACAATGAGATGGAATGTGTCAAAATGCATGACTTAATACGAGATATGGCCGTGACAATCATGAAAACAGATCCTCGATGGCACTGCATTGTCAAAGCCGGCAACAAATTGAAGAAACCTCCCCAAATTGATGAATGGACAGAAGATGCTCTAAGGGTGTCATTGATGAAAAATGATTTGAATAATATCTTTCTTGGCAATCCTCCATCATGTCCAGCTGTTACTTCCCTGTTATTGCAATACAACTCTTTCCCTCAAAACATACCTTATGACTTCTTTGATTTCATGCAAAGCCTAAAGGTTCTTGATCTCTCTTACACTGGGATCCATGTGCTGCCGGGTTCGGTTTCTAACTTAGAGAATCTATGTGCCTTATTATTGAGCAATTGCTGGAATTTGAAATTGATCCCTTCTGTGGCAAAACTCACTAAGTTGATGGTTCTCGACCTTTCGGGTTGCCGAAACATAAAGCAACTTCCCCATGGGACAGAACAGCTATGCAACCTGAGAAGACTAAATATTTCCAATACCATGATTAACATCTTGCCATCTGGTTTTCTCTCAGCTTTAACCCTTCTAGAGGAGTTATTAGCATCTAATGCTCTCGTCTTTCAAAAGTCATTGCCACTGAGCGTTTCTGAAATCAGCATCGGTGAAATCATATCCTCCTCAAGATTATCATCTCTTGAAGTGGATTTCTGGCACTGTGATCTCTATAATCTGTATGCTTGCTCTGGTCACTGTGCTCAGCTAGAGAAGTTCAAGTTCAATGTTGGACCAGGAGAAATCCAAGAATTTTCGGAGAAATGGAGTGTGGCATTTCTCAGCATATCCATTGCCAAAGAGGAAATTTCAATCCCAGAAAATACTACCGAGTTGAAGTTTATTGACTGCTATGATATCACAGAGTTAACTACTTGCCTTTTGCATGCAGAGAAGCTCAAGAAATGCACAGTAGTTTGCTGTTACAGTGTAGAAAGAATTGTTGACACTGAGCAGATTGATTTATCTATGCTGGAGACTTTGGTGCTGAGATATTTGATCAATTTGCAGATGATATGTAGGGAAGTGATGCCTTCATCTGCATTTATGAGATTAAAGATCATAAATGTAGAATTTTGTCCAAATTTGAAGAGCCTATTCTCAGGGAACCTTTTGCTTCAACTGTCAAATCTTGAAGAAATTAGAGTCGGCCACTGCAACAAGATGGAGGATTTGATGAGATGGGAAGGAGGAGGAAGAAACAGTAATGACATTCATGCTGCCAAAATTCACTTGCCTAGATTAAGGAAATTGAGGTTGGAGTTCATGCCAAATTTAAAAGGAATATATGATGGATTCATGAGTTATGGCTCTCCATGCTCTTTTCAAGTAGTTTCTTGTGATGCACTGAAGAGATTACCCTTTGATCTTGATGAATTAGTAGGCCTTAACCAGCAACTATTGTCACCGCATGCTTTGGAAATCAAAGGAGCAAAGTGTTGGTGGGATTCACTTGAGTGGGATGAACCTGATGCCAAGCAAATAATGCAGACATATTTCATAGAGATGCCAATAGTGTCAGATAATGTTGATAGCAGCAGCCAAGTAGGAGCAATAGTTCCTAATAGATAG 3030 0.399 MAINIVGAITGVMSCLCTQNCLQESLGHHIRHLRRPKRNLNKLKSLLEELDARKVDMCAKLNQMWLQKGMNPKKEVELWLKNVDEIANEVNKIIREVEQESGSTSVLSPFYYSSRIKRGELIEKKMEEVRELLEKGRFADDSLAETSPRKGHTLPTTKLMEHETTMKSLNKILNFILDDRVRIIGVHGMGGVGKTTIMAEINNRLLRENRLFDSVIWVSSSKDMKTEELQKVIAGKFDIDLSGFQDETSRAATLFEAFQRRKNFALILDDLWEPFSLERVGIPIPTVENGCKLLITTRRVSVCRGMETDRDVKVKALTENEAWDLFRDKVGDEALASPDIKLIAKDVAKECMGLPLGIVTVGRALRNATDSSEWQISLMGLKASALNIEQMEESVFSRLKFSFTKLKDDTSRSCFLYCALYPEGNHVDANALIEYWMWEGLLGAVDSISTSKQKGKIILNELKYACLLENAADNEMECVKMHDLIRDMAVTIMKTDPRWHCIVKAGNKLKKPPQIDEWTEDALRVSLMKNDLNNIFLGNPPSCPAVTSLLLQYNSFPQNIPYDFFDFMQSLKVLDLSYTGIHVLPGSVSNLENLCALLLSNCWNLKLIPSVAKLTKLMVLDLSGCRNIKQLPHGTEQLCNLRRLNISNTMINILPSGFLSALTLLEELLASNALVFQKSLPLSVSEISIGEIISSSRLSSLEVDFWHCDLYNLYACSGHCAQLEKFKFNVGPGEIQEFSEKWSVAFLSISIAKEEISIPENTTELKFIDCYDITELTTCLLHAEKLKKCTVVCCYSVERIVDTEQIDLSMLETLVLRYLINLQMICREVMPSSAFMRLKIINVEFCPNLKSLFSGNLLLQLSNLEEIRVGHCNKMEDLMRWEGGGRNSNDIHAAKIHLPRLRKLRLEFMPNLKGIYDGFMSYGSPCSFQVVSCDALKRLPFDLDELVGLNQQLLSPHALEIKGAKCWWDSLEWDEPDAKQIMQTYFIEMPIVSDNVDSSSQVGAIVPNR* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0517 1009 Pfam Leucine rich repeat 545 602 IPR001611 GO:0005515
Ahy20g0517 1009 Gene3D Ribonuclease Inhibitor 833 960 IPR032675 -
Ahy20g0517 1009 PANTHER DISEASE RESISTANCE PROTEIN RP 26 950 IPR044974 GO:0006952
Ahy20g0517 1009 Gene3D - 403 491 IPR036388 -
Ahy20g0517 1009 SUPERFAMILY L domain-like 476 942 - -
Ahy20g0517 1009 Coils Coil 80 100 - -
Ahy20g0517 1009 Coils Coil 40 60 - -
Ahy20g0517 1009 Gene3D - 143 313 IPR027417 -
Ahy20g0517 1009 Gene3D - 316 402 IPR042197 -
Ahy20g0517 1009 PANTHER OS12G0491200 PROTEIN 26 950 - -
Ahy20g0517 1009 Pfam NB-ARC domain 167 403 IPR002182 GO:0043531
Ahy20g0517 1009 Gene3D Ribonuclease Inhibitor 498 740 IPR032675 -
Ahy20g0517 1009 PRINTS Disease resistance protein signature 258 272 - -
Ahy20g0517 1009 PRINTS Disease resistance protein signature 612 628 - -
Ahy20g0517 1009 PRINTS Disease resistance protein signature 183 198 - -
Ahy20g0517 1009 PRINTS Disease resistance protein signature 351 365 - -
Ahy20g0517 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 418 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0517 Ahy-Chr20 5298141 5304478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0517 181 655 WRKY Transcription Factor Family AT5G45050 22.624 2.34e-16 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0517 - K13459 ahf:114924594 920.998