Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0505 ATGGACGGAATGTGCCGGAAGGACGACTCTGAATCCCAAAAACTACCTCAGGTTCTCCACAAAGTTTCTACCTTTGTCTTGTTCAGTGGTGTTAGTTCAACTTGGTGTGTGTCTTTGGAGTTCATTGTTGCAGTGGAGGCCTCAGTTTTGGAAACTTTACCCTTTGAAGAAATGGGATGTACAAATTTGGTGTTGCATGTTCGACTCTTTGTTACTCTGATGGTGATTCTTGCTGGAACTTTCTGTGCAGTTGGTGACACTGACGTAGTTGATGTTGCAGCAATCAGTAGTCTATATGTTGCTCTTGGCTCACCACCTCTTCTAGGGTGGAAGCCTGTGGGAGGAGATCCATGTTTTGAAATGTGGCAAGGTGTTGGCTGTGTATTTTCCAACATCACTTCCATAAGACTTGATGGCCTGAATTTGGGTGGAGAGCTTGGTAGTAATTTGAATTTTCCATCCATCTTAGAAATTGATCTTAGCAACAACCACATTGGAGGGCCCATTCCATTCACTTTGCCCCCTACTCTTACGAGCTTGTCTCTCTCAGGAAACCAGTTAAATGGAAGCATTCCAGATGCTTTATCATTACTAACTCAATTGTCACACTTGGATTTGTCAAATAACAACTTGAGTGGTCAGCTGCCTTCCTCAACAGGGACTTTATCATCCCTTACTACATTATACTTGCAGAACAATCAACTCTCTGGGACCCTTTATGTTTTGCAGGACCTGCCTCTTCAGGATCTGAATATTGAGAATAACTCCTTCTCCGGGCCAATTCCGCCAAAACTGCTGAGTGTCCCTATTTTCAGAAAAGATGGAAATCCATTTAATACTAGTGTTATTCCATCACCTGCTGCAGCCCCATCACCTGCAGCTATGGCTCCATCCCCTGGGAAATCACCATGGAGAGTAGCAAATAGTCCTTCTTCCCCAACTGCATCAATGCTTGCAAGTGCTAGGAAGTCATTTATAGCTAAGAATATCATTTGGATTGCTGGTGCTGGTCTTTTGATATTTATTTTGTTAGGCGTTTGTATTTTTATGCTGTGGTGCTTTAAACGAAGGCCAGAGAAGAAAAATGCCAAGAAGCAAAATGTTAGTGTCTTCGAAAGTCCTTTACATAAACCTACTTGCAGTGACACTTCCTTTGAAGCAACCAATCAGGAGGTGAAAGCAGTTGAGAAACCATCACTTGTATCTGAAGTGCTAAATAGAAAAACAAATTTGATTCCAAAGGTTCAGGATGAACAAGGAAAATATGTGAAAACAGCATCTGCAACTTCACAATACAATCATGGTTCTGAGTTAATCAACACTAGTGAGGCTTCCAAACTTTCACACCTCCAGCCACCACCGCGTCCTTACCCAATGACACAAAGTCAGAAGTTGATCCTCAATCCAGCTATACCTGCCAAAGGGTCTGAAATAAATGACAAAACATGTTCCCTTGAAGTTTATTCTATTGCATCACTTCAACAATATACCAATAGCTTTTCCCAAGAAAATTTTATTGGGGAAGGCACCTTAGGGCCTGTTTATAGGGCTGAGTTCCCTGATGGAAAGATATTGGCTGTGAGGAAATTAGATGCCACTGCTTCTATGGAGCAGAACCATGAACAATTTCTCCAATTAGTGTCCAACATCTCAAAAATTCAGCACCCTAATATTGTGAAGTTTACGGGCTACTGTACCGAGTATAGCCAACGGCTGCTTGTGTACGAGTATTGCAGTAATGGAACCCTGCATGATGCACTGCATGGCGATAGTGAATGCCGTATTAGACTAACATGGAATGCTCGAATTCAGGTGGCTCTTGGAGCTGCAAGAGCTTTAGAGTATATGCATGAGAACTTTCGGCCACCTATTGTGCACCGAAATTTTAAGTCTGCCAATGTACTCCTAAATGACAACCTTGAAGTGTGCATCTCTGATTGTGGATTAGGTCCTTTGCTATCTTCTGGCTCTGCTGGTCAGTTATCAGGACGACTCCTCACGGCTTATGGTTACAGTGCTCCAGAATTTGAGTTCGGAAGCTATACACATCAAAGTGATGTATTCAGTTTTGGAGTGGTAATGTTGGAACTTCTCACGGGACGAAAATCCCACGACAGGTCACTTCCGCGAGGGGAGCAAATATTGGTGAGATGGGCAGTCCCTCAACTCCATGACATTGATGCATTGTCGAAAATGGTTGACCCCAGCTTAAATGGAGCCTATCCTATGAAGTCCTTGTCGCGTTTTGCAGATATTGTTTCTTCATGCGTCCAGCATGAACCTGAATTCAGGCCAGCAATGTCTGAAGTTGTTCAAGATCTTCTAAGGATGATGTAA 2337 0.4288 MDGMCRKDDSESQKLPQVLHKVSTFVLFSGVSSTWCVSLEFIVAVEASVLETLPFEEMGCTNLVLHVRLFVTLMVILAGTFCAVGDTDVVDVAAISSLYVALGSPPLLGWKPVGGDPCFEMWQGVGCVFSNITSIRLDGLNLGGELGSNLNFPSILEIDLSNNHIGGPIPFTLPPTLTSLSLSGNQLNGSIPDALSLLTQLSHLDLSNNNLSGQLPSSTGTLSSLTTLYLQNNQLSGTLYVLQDLPLQDLNIENNSFSGPIPPKLLSVPIFRKDGNPFNTSVIPSPAAAPSPAAMAPSPGKSPWRVANSPSSPTASMLASARKSFIAKNIIWIAGAGLLIFILLGVCIFMLWCFKRRPEKKNAKKQNVSVFESPLHKPTCSDTSFEATNQEVKAVEKPSLVSEVLNRKTNLIPKVQDEQGKYVKTASATSQYNHGSELINTSEASKLSHLQPPPRPYPMTQSQKLILNPAIPAKGSEINDKTCSLEVYSIASLQQYTNSFSQENFIGEGTLGPVYRAEFPDGKILAVRKLDATASMEQNHEQFLQLVSNISKIQHPNIVKFTGYCTEYSQRLLVYEYCSNGTLHDALHGDSECRIRLTWNARIQVALGAARALEYMHENFRPPIVHRNFKSANVLLNDNLEVCISDCGLGPLLSSGSAGQLSGRLLTAYGYSAPEFEFGSYTHQSDVFSFGVVMLELLTGRKSHDRSLPRGEQILVRWAVPQLHDIDALSKMVDPSLNGAYPMKSLSRFADIVSSCVQHEPEFRPAMSEVVQDLLRMM* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0505 778 SUPERFAMILY L domain-like 122 285 - -
Ahy20g0505 778 SUPERFAMILY Protein kinase-like (PK-like) 483 774 IPR011009 -
Ahy20g0505 778 Gene3D Transferase(Phosphotransferase) domain 1 578 778 - -
Ahy20g0505 778 PRINTS Leucine-rich repeat signature 177 190 - -
Ahy20g0505 778 PRINTS Leucine-rich repeat signature 198 211 - -
Ahy20g0505 778 Gene3D Phosphorylase Kinase; domain 1 471 577 - -
Ahy20g0505 778 Pfam Protein tyrosine and serine/threonine kinase 503 774 IPR001245 GO:0004672|GO:0006468
Ahy20g0505 778 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 198 778 - -
Ahy20g0505 778 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 67 211 - -
Ahy20g0505 778 PANTHER LEUCINE RICH REPEAT KINASE 2 198 778 - -
Ahy20g0505 778 PANTHER LEUCINE RICH REPEAT KINASE 2 67 211 - -
Ahy20g0505 778 ProSiteProfiles Protein kinase domain profile. 500 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0505 778 MobiDBLite consensus disorder prediction 289 308 - -
Ahy20g0505 778 Gene3D Ribonuclease Inhibitor 93 288 IPR032675 -
Ahy20g0505 778 ProSiteProfiles Leucine-rich repeat profile. 176 198 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0505 Ahy-Chr20 5202397 5211477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0505 87 778 Strubbelig Receptor Gene Family AT4G03390 50.000 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Ahy20g0505 PK_Tyr_Ser-Thr 8.70E-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0505 - - ahf:112783685 1412.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0505 20 5202397 5211477 Ahy10g0320 10 2967680 2973301 hybridization
Ahy13g3284 13 129698843 129703036 Ahy20g0505 20 5202397 5211477 PCT
Ahy3g3019 3 127098239 127102415 Ahy20g0505 20 5202397 5211477 PCT
Ahy20g0505 20 5202397 5211477 Ahy13g3284 13 129698843 129703036 PCT
Ahy20g0505 20 5202397 5211477 Ahy3g3019 3 127098239 127102415 PCT