Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0447 ATGGGTGAAGATCACAATTCTTGGTTAAGGAGGACAAAATTCTCTCATACTGTGTGCCACCGCTTGAATCCTTCGACACTTGCTTCTATTCCTCTCAGCATTGAGACAGAGCACAATTCAGGTCTGAAATCAAGACCTTCTTACCCGCAGAGATCTTCTTCACCCTTGCCCGAAACTTCGCTTTCTGATACCTTTAGGGAAGCACGGCATGATCAAAAGAGGTTCTCAACACCAGGTCCTAGGGGGAAGCCCAGCAATGAGGGAAACATGGATAAGTTGCGGAGCAAGGAGCTTGGGGAAAGTAAGGTTTTGAGGTTGAAATCGCGTTCCAATAGTCCAAATGGGCTAGTGAAACCAGATAATAACTCAAACCACCAAAAGGATTTAGCCTGGACCAAGTGTTTAGACAACAGTGGAGGAGGAAAGGTTACCGAAACAGATGAACGATGGAATGTTGACCTCTCTAAGTTGTTTCTTGGCCTTAAGTTTGCTCATGGCGCTCATAGTCGGCTTTATCATGGTGTATATAAGGAAGAGTCTGTTGCAGTTAAAATTATTAGAGTACCTGATGATGATGAAAATGGAACCTTGGCTTCTCGGTTAGAGAATCAGTTCGCTAGAGAAGCCACCCTTTTATCTCATCTTCACCATCCGAATGTTATAAAGTTAGTAGCAGCATGCAGAAAGCCACCGGTTTACTGTATCATCACAGAGTATCTATCAGAAGGTTCTTTGAGGGCATACTTGCATAAGTTGCAGCACAAACCTATGTCTCTACAAAAGCTAATAACTTTTGCTCTAGATATTGCTCGCGGGATGGAATATATACACTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTTCTCATTGACGAAGACTCCCACCTCAAAATTGCGGATTTTGGAATTGCTTGTGAGGAGGTAGTCTGTGATTTATTGGCTGATGACCCGGGCACCTACCGATGGATGGCGCCTGAGATGATCAAACGTAAATCCTATGGGAGAAAGGTTGATGTCTACAGTTTTGGGCTTATGTTATGGGAAATGTTGACTGGAACAATACCATATGAGGAAATGACTCCAATCCAGGCTGCTTTTGCTGTAGTAAATAAGAACTCAAGGCCAGTTATTCCTTCTGACTGCCAACCTGCTATGCGAGCTTTAATTGAGCAATGTTGGTCCTCGCAACCCGATAAGAGGCCGGATTTCTGGCAGATTGTTAAGGTATTAGAGCAATTCGAATCCTCGCTTGCCCAAGACGGGACCCTGACTCTGGTACAAAACCCTCTTTCCCATGATCATAAGAAAGGTCTTCGGCATTGGATTCAAAAGCTTAGTCCTGCGTATCCAAATGGCCATGTGCCTAAACCCAAATTCACATGA 1392 0.4404 MGEDHNSWLRRTKFSHTVCHRLNPSTLASIPLSIETEHNSGLKSRPSYPQRSSSPLPETSLSDTFREARHDQKRFSTPGPRGKPSNEGNMDKLRSKELGESKVLRLKSRSNSPNGLVKPDNNSNHQKDLAWTKCLDNSGGGKVTETDERWNVDLSKLFLGLKFAHGAHSRLYHGVYKEESVAVKIIRVPDDDENGTLASRLENQFAREATLLSHLHHPNVIKLVAACRKPPVYCIITEYLSEGSLRAYLHKLQHKPMSLQKLITFALDIARGMEYIHSQGVIHRDLKPENVLIDEDSHLKIADFGIACEEVVCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLMLWEMLTGTIPYEEMTPIQAAFAVVNKNSRPVIPSDCQPAMRALIEQCWSSQPDKRPDFWQIVKVLEQFESSLAQDGTLTLVQNPLSHDHKKGLRHWIQKLSPAYPNGHVPKPKFT* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0447 463 MobiDBLite consensus disorder prediction 38 133 - -
Ahy20g0447 463 ProSiteProfiles Protein kinase domain profile. 157 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0447 463 CDD STKc_MAP3K-like 164 413 - -
Ahy20g0447 463 Gene3D Phosphorylase Kinase; domain 1 146 241 - -
Ahy20g0447 463 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 440 - -
Ahy20g0447 463 MobiDBLite consensus disorder prediction 87 104 - -
Ahy20g0447 463 PRINTS Tyrosine kinase catalytic domain signature 275 293 IPR001245 GO:0004672|GO:0006468
Ahy20g0447 463 PRINTS Tyrosine kinase catalytic domain signature 321 331 IPR001245 GO:0004672|GO:0006468
Ahy20g0447 463 PRINTS Tyrosine kinase catalytic domain signature 237 250 IPR001245 GO:0004672|GO:0006468
Ahy20g0447 463 PRINTS Tyrosine kinase catalytic domain signature 384 406 IPR001245 GO:0004672|GO:0006468
Ahy20g0447 463 PRINTS Tyrosine kinase catalytic domain signature 340 362 IPR001245 GO:0004672|GO:0006468
Ahy20g0447 463 MobiDBLite consensus disorder prediction 38 61 - -
Ahy20g0447 463 SMART serkin_6 157 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy20g0447 463 MobiDBLite consensus disorder prediction 63 77 - -
Ahy20g0447 463 MobiDBLite consensus disorder prediction 105 131 - -
Ahy20g0447 463 Pfam Protein tyrosine and serine/threonine kinase 162 413 IPR001245 GO:0004672|GO:0006468
Ahy20g0447 463 Gene3D Transferase(Phosphotransferase) domain 1 242 446 - -
Ahy20g0447 463 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 440 - -
Ahy20g0447 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Ahy20g0447 463 SUPERFAMILY Protein kinase-like (PK-like) 141 413 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0447 Ahy-Chr20 4502593 4505788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0447 1 463 MAP Kinase Kinase Kinase AT5G58950 53.333 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Ahy20g0447 PK_Tyr_Ser-Thr 2.90E-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0447 - - gmx:100500590 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0447 20 4502593 4505788 Ahy10g0267 10 2389669 2392838 hybridization
Ahy13g3351 13 130545565 130549518 Ahy20g0447 20 4502593 4505788 PCT
Ahy3g3082 3 128084204 128088202 Ahy20g0447 20 4502593 4505788 PCT
Ahy20g0447 20 4502593 4505788 Ahy13g3351 13 130545565 130549518 PCT
Ahy20g0447 20 4502593 4505788 Ahy3g3082 3 128084204 128088202 PCT