Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0416 ATGGGGGTAGACTACTATAAGATTCTGCAGGTTGATAAGAGTGCCACAGATGATGACTTGAAGAAAGCTTATAGAAAGCTTGCCATGAAATGGCACCCTGATAAGAACCCAAACAATAAGAAAGAAGCCGAGTCTAAATTCAAGCAGATATCCGAAGCCTATGAGGTTCTGAGTGATCCACAGAAGAGAGCAATTTATGATCAATATGGAGAAGAAGGGCTAAAAGGGCAAGTGCCACCTCCAGATGCAGCAGGTGCAGGTGGTGCTTCATTCTTCCAAACTGGTAATGGGACAACAACGTTCAGGTTCAATCCCAGGAATGCAGATGACATATTTGCCGAGTTCTTTGGATTTTCAAGCCCCTTCGGGGGAATGGGAGGTGGTGGTTCCGGTGCCGGGATGAGGGGTGGTGGAACAAGGTCATTTGGTGGAATCTTTGGTGATGATATATTCAATTCATTTGGAGAAGGAAGGCCAATGAGTCAGGGTCCACGGAAGGCACCTCCTATAGAAAGAACATTGCCTTGCACCCTTGAAGAACTTTATAAGGGCACTACCAAAAAGATGAAGATCTCAAGGGAAATTGCTGATGCAAGCGGTAAAACTTTGCCGGTGGAGGAAATCTTAACCATAGAAATCAAACCGGGGTGGAAGAAAGGGACAAAGATAACGTTCCCGGAGAAAGGAAACGAGCAACCAAATGTGATTGCTGCAGATCTTGTGTTTGTGATTGATGAGAAAGCACACCGTGTGTTCACAAGAGATGGAAATGACTTGGTTGTGACACACAAGATTTCACTTTCTGAAGCTCTAACAGGTTACACTGTCCATTTGAAAACTCTAGATGGCAGGGTTCTTAGCATTCCCATAAACAATGTGATTCATCCAAGCTATGAAGAAGTGGTTCCTAGGGAAGGAATGCCAATTCCCAAAGACCCTTCTAAGAAGGGTAACCTTAGGATCAAGTTTGATATCAAGTTCCCAGCAAGGTTGACTTCTGACCAAAAAACTGGACTTAAGAAACTTCTGGGGCCATAG 1038 0.4432 MGVDYYKILQVDKSATDDDLKKAYRKLAMKWHPDKNPNNKKEAESKFKQISEAYEVLSDPQKRAIYDQYGEEGLKGQVPPPDAAGAGGASFFQTGNGTTTFRFNPRNADDIFAEFFGFSSPFGGMGGGGSGAGMRGGGTRSFGGIFGDDIFNSFGEGRPMSQGPRKAPPIERTLPCTLEELYKGTTKKMKISREIADASGKTLPVEEILTIEIKPGWKKGTKITFPEKGNEQPNVIAADLVFVIDEKAHRVFTRDGNDLVVTHKISLSEALTGYTVHLKTLDGRVLSIPINNVIHPSYEEVVPREGMPIPKDPSKKGNLRIKFDIKFPARLTSDQKTGLKKLLGP* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0416 345 PRINTS DnaJ domain signature 42 62 IPR001623 -
Ahy20g0416 345 PRINTS DnaJ domain signature 24 39 IPR001623 -
Ahy20g0416 345 PRINTS DnaJ domain signature 62 81 IPR001623 -
Ahy20g0416 345 PRINTS DnaJ domain signature 6 24 IPR001623 -
Ahy20g0416 345 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 255 IPR008971 GO:0006457|GO:0051082
Ahy20g0416 345 Gene3D DnaJ domain 3 129 IPR036869 -
Ahy20g0416 345 CDD DnaJ 4 59 IPR001623 -
Ahy20g0416 345 Pfam DnaJ C terminal domain 170 328 IPR002939 -
Ahy20g0416 345 SUPERFAMILY Chaperone J-domain 3 128 IPR036869 -
Ahy20g0416 345 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Ahy20g0416 345 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 344 - -
Ahy20g0416 345 Pfam DnaJ domain 4 67 IPR001623 -
Ahy20g0416 345 CDD DnaJ_C 168 331 - -
Ahy20g0416 345 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Ahy20g0416 345 Gene3D - 169 248 - -
Ahy20g0416 345 SUPERFAMILY HSP40/DnaJ peptide-binding domain 251 337 IPR008971 GO:0006457|GO:0051082
Ahy20g0416 345 SMART dnaj_3 3 62 IPR001623 -
Ahy20g0416 345 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 344 - -
Ahy20g0416 345 Gene3D - 249 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0416 Ahy-Chr20 4214675 4216262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0416 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 2.79e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0416 K09510 - zju:107425032 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0416 20 4214675 4216262 Ahy20g0416 20 4214675 4216262 ECH
Ahy20g0416 20 4214675 4216262 Ahy10g0232 10 2139168 2140998 hybridization