Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0415 ATGGGGTTGGACTACTATAGGACCTTGGAGGTAGAGAGAACTGCCACAGATGAAGACTTGAAGAAAGCTTATAGAAAGCTTGCCATGAAATGGCACCCTGATAAGAATCCAACCAACAACAAAGATGCTGAGACTAAATTCAAACAGATCTCTGAAGCCTATGAGGTTCTAAGTGATCCGCATAAGAGAGCAATTTGTGATCAATATGGAGAAGATGTCCTTAAAGGGAAAAGACAACCTCCTGGTGGTGGTGGTGGTGGTGGAGCTTCATTCTTCCATGGTGGGGATGGACCAACAATGTTTAGGTTCAACCCCAGAAATGCAGAAAGCATCTTTGCTGAAGTTTTTGGATCTTCAAGCCCCTATGGAGGAATGGGAATGGGAAGGGGAAGGGGCATGAGGGGTGGTTATGGTGGATCTTGGGTGTCAAGATCCTTTGGTGGAATATTTGGCAGTGACATGTTCAGTTCAGCTAGAGAAGAAGCCACACCCATGAATCAAAGTCCACGCAGGGCTCCTCCCATTGAAAACACACTACTTTGCACCCTTGAGGAACTCTACAAGGGCACTACCAAAAAGATGAAGATTTCAAGGGAAGTTGTGGATGCAAGTGGGAAAGTTATTCATGTGGAGGAAATCTTGACCATTGAAATCAAACCTGGCTGGAAAAAGGGAACAAAAGTCACATTCCAGGAGAAAGGAAACCAGCAGCCAAATGTAATTGCTGCAGATATTGTGTTCATCATTGATGAGAAGCCTCACAATGTGTTTACAAGAGACGGTAATGATTTGGTTGTCACAGAAGAGATATCACTTACCGAAGCTGAAGCACAATCAAGCTACACTGTCCATCTTACAACTCTAGATGGCAGGGATCTGACCATTGCTGTAAACAATGTGATTAGTCCAAACTATGAAGAGGTGGTTGCAGGAGAAGGTATGCCGTTTCCAAAGGATCCTTCAAAGAGGGGTGACCTTAGGATCAAGTTCAACATACTAGTCACAGACAAGGTTGATGCTGGGGCAGAAAATCAAAACTAG 1041 0.4419 MGLDYYRTLEVERTATDEDLKKAYRKLAMKWHPDKNPTNNKDAETKFKQISEAYEVLSDPHKRAICDQYGEDVLKGKRQPPGGGGGGGASFFHGGDGPTMFRFNPRNAESIFAEVFGSSSPYGGMGMGRGRGMRGGYGGSWVSRSFGGIFGSDMFSSAREEATPMNQSPRRAPPIENTLLCTLEELYKGTTKKMKISREVVDASGKVIHVEEILTIEIKPGWKKGTKVTFQEKGNQQPNVIAADIVFIIDEKPHNVFTRDGNDLVVTEEISLTEAEAQSSYTVHLTTLDGRDLTIAVNNVISPNYEEVVAGEGMPFPKDPSKRGDLRIKFNILVTDKVDAGAENQN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0415 346 Pfam DnaJ domain 4 67 IPR001623 -
Ahy20g0415 346 Gene3D - 172 253 - -
Ahy20g0415 346 SUPERFAMILY Chaperone J-domain 4 98 IPR036869 -
Ahy20g0415 346 CDD DnaJ 4 59 IPR001623 -
Ahy20g0415 346 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Ahy20g0415 346 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 335 - -
Ahy20g0415 346 SUPERFAMILY HSP40/DnaJ peptide-binding domain 256 336 IPR008971 GO:0006457|GO:0051082
Ahy20g0415 346 Pfam DnaJ C terminal domain 176 332 IPR002939 -
Ahy20g0415 346 CDD DnaJ_C 173 337 - -
Ahy20g0415 346 PRINTS DnaJ domain signature 6 24 IPR001623 -
Ahy20g0415 346 PRINTS DnaJ domain signature 62 81 IPR001623 -
Ahy20g0415 346 PRINTS DnaJ domain signature 24 39 IPR001623 -
Ahy20g0415 346 PRINTS DnaJ domain signature 42 62 IPR001623 -
Ahy20g0415 346 SMART dnaj_3 3 62 IPR001623 -
Ahy20g0415 346 Gene3D DnaJ domain 3 126 IPR036869 -
Ahy20g0415 346 SUPERFAMILY HSP40/DnaJ peptide-binding domain 169 265 IPR008971 GO:0006457|GO:0051082
Ahy20g0415 346 Gene3D - 254 334 - -
Ahy20g0415 346 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0415 Ahy-Chr20 4211798 4213549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0415 5 74 C2H2 Transcription Factor Family AT1G74250 32.432 2.86e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0415 K09510 - jre:108984177 473.011